Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002062.1 Length=351 Score E Sequences producing significant alignments: (Bits) Value seq54916 105 1e-20 seq92822 86.0 1e-14 seq63840 77.0 7e-12 >seq54916 Length=567 Score = 105 bits (116), Expect = 1e-20 Identities = 112/144 (78%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 1 ACCAGGTCACCATCGTCGGCGCCGAATGCCGACCACGGTGCCGGTGTACCAGCGGGGTGA 60 ||||| || ||||||||||| |||| ||| || ||| ||||||||| | ||||| ||| Sbjct 154 ACCAGATCGCCATCGTCGGCACCGA-TGCTGATCACCGTGCCGGTGGTCT-GCGGG-TGA 98 Query 61 TTTCCACCACGTCGCCGTTCACATAGGCGTCATCGGTGCTTTCATTGAAGCGCCCGTAGA 120 |||||||| ||| |||||| || ||||| || |||||||| || |||| || |||| Sbjct 97 TTTCCACCGCGTTGCCGTTGACGTAGGCATCGTCGGTGCTCTCGCCCCAGCGGCCATAGA 38 Query 121 ACTCATACCAGGCCCACACGCCCA 144 |||| ||||||||| | |||| Sbjct 37 GTTCATGCCAGGCCCAGGCACCCA 14 >seq92822 Length=575 Score = 86.0 bits (94), Expect = 1e-14 Identities = 122/168 (73%), Gaps = 3/168 (2%) Strand=Plus/Minus Query 35 ACGGTGCCGGTGTACCAGCGGGGTGATTTCCACCACGTCGCCGTTCACATAGGCGTCATC 94 |||||||||||| | | |||||||||| | ||||| || |||| ||| ||||| || || Sbjct 504 ACGGTGCCGGTG-ATCTGCGGGGTGATCTGCACCAGGTTGCCGCCCACGTAGGCATCGTC 446 Query 95 GGTGCTTTCATTGAAGCGCCCGTAGAACTCATACCAGGCCCACACGCCCACCACACTGAG 154 ||| ||| | |||||||||||||| || | |||| | ||| || | | || Sbjct 445 GGTCTCTTCGTAGAAGCGCCCGTAGAGTTCGTGGTAGGCGAAGACGGCCGCGCTGCACAG 386 Query 155 GATGACGATCAGCGCC-AGGCCGATCAGCATCACTTTGCGTTTGCGCG 201 | |||||| | |||| ||||| ||||||| |||||| |||| || Sbjct 385 CACGACGATGA-CGCCGAGGCCAATCAGCAGGCGTTTGCGCTTGCCCG 339 >seq63840 Length=454 Score = 77.0 bits (84), Expect = 7e-12 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 10 CCATCGTCGGCGCCGAATGCCGACCACGGTGCCGGTGTACCAGCGGGGTGATTTCCACCA 69 || ||||||||| ||| ||| ||||||||||||| |||| ||||||||| | ||||| Sbjct 130 CCGTCGTCGGCGTCGA-TGCGCACCACGGTGCCGG-CCACCATCGGGGTGATCTGCACCA 187 Query 70 CGTCGCCGTTCACATAGGCGTCATCGGTG 98 || ||| | ||| |||||||| |||||| Sbjct 188 GGTTGCCCTGCACGTAGGCGTCGTCGGTG 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1019469897600