Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq92278 179 8e-43 seq81012 178 3e-42 seq79132 134 3e-29 seq60286 122 2e-25 seq83018 107 4e-21 seq83017 107 4e-21 seq72681 107 4e-21 seq128400 104 5e-20 seq83016 104 5e-20 seq63936 82.4 2e-13 >seq92278 Length=492 Score = 179 bits (198), Expect = 8e-43 Identities = 182/236 (77%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 1 CGAGCGC-AAAGAAGTGCAACATGCGTTCGGCATCCAGGGTCTGGTGCCGCTCCAGGTAG 59 |||| || |||||| |||| || ||| |||| | ||||| |||| ||| ||||| Sbjct 166 CGAGGGCGAAAGAAATGCAGCAGGCGCTCGGGGTGCAGGGCGCCGTGCTTTTCCCGGTAG 225 Query 60 CTGTCCAGGGTGCCGCTGCTGAGCAACGACATCGCCAGTTCATCCAGGCCATCGCTGCGC 119 |||||||||||| || |||||| || ||| ||||| || |||||||| ||| || Sbjct 226 TCATCCAGGGTGCCGGTGATGAGCAGCGGCATGGCCAGCTCGTCCAGGCCTCCGCCCTGC 285 Query 120 CCGGCCTGGGGCATCAAGGACAACGAATAACTGACTTCCAGCATGCGTGCCAGGTTCTCG 179 ||| ||| ||||||| |||| ||||| ||||| |||||||| || || ||||||||| Sbjct 286 CCGCTCTGCGGCATCATCGACAGTGAATAGCTGACGTCCAGCATCCGCGCGAGGTTCTCG 345 Query 180 GCGCGCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTGTTCTACGCAGCAT 235 ||||||||||||| || |||||||| |||||||| ||||| || | || || ||| Sbjct 346 GCGCGCTCCAGGTTGCGGGACATCCAGTACAGATCGGCAGCGGTACGACTCAACAT 401 >seq81012 Length=489 Score = 178 bits (196), Expect = 3e-42 Identities = 179/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 3 AGCGCAAAGAAGTGCAACATGCGTTCGGCATCCAGGGTCTGGTGCCGCTCCAGGTAGCTG 62 || || ||||| |||| || ||| |||| | ||||| |||| ||| ||||| Sbjct 168 AGGGCGAAGAAATGCAGCAGGCGCTCGGGGTGCAGGGCGCCGTGCTTTTCCCGGTAGTCA 227 Query 63 TCCAGGGTGCCGCTGCTGAGCAACGACATCGCCAGTTCATCCAGGCCATCGCTGCGCCCG 122 |||||||||||| || |||||| || ||| ||||| || |||||||| ||| ||||| Sbjct 228 TCCAGGGTGCCGGTGATGAGCAGCGGCATGGCCAGCTCGTCCAGGCCTCCGCCCTGCCCG 287 Query 123 GCCTGGGGCATCAAGGACAACGAATAACTGACTTCCAGCATGCGTGCCAGGTTCTCGGCG 182 ||| ||||||| |||| |||||| ||||| |||||||| || || || ||||||||| Sbjct 288 CTCTGCGGCATCATCGACAGCGAATAGCTGACGTCCAGCATCCGCGCGAGATTCTCGGCG 347 Query 183 CGCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTGTTCTACGCAGCAT 235 |||||||||| || |||||||| |||||||| ||||| || | || || ||| Sbjct 348 CGCTCCAGGTTGCGGGACATCCAGTACAGATCGGCAGCGGTACGACTCAACAT 400 >seq79132 Length=1043 Score = 134 bits (148), Expect = 3e-29 Identities = 112/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 246 CCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTT 305 ||| ||||||||||||||| || || ||||| |||||||| ||||||||||||||||| | Sbjct 748 CCAGCACCCAGGTGTCCTTCGTGCCGCCGCCCTGCGACGAATTGACGACCAGCGAGCCCT 807 Query 306 CCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCCTTGCCCGAGAGCA 365 |||||||||||||||| || | ||| |||| ||||| | | || ||| || |||| Sbjct 808 CCTTCAGCGCCACGCGCGTGAGGCCGCCGGCCACCATCTGCACCTTCTGGCCAGAAAGCA 867 Query 366 CGAAGGGTCGCAAGTCG 382 ||||||| |||| |||| Sbjct 868 CGAAGGGCCGCAGGTCG 884 >seq60286 Length=515 Score = 122 bits (134), Expect = 2e-25 Identities = 110/135 (81%), Gaps = 4/135 (3%) Strand=Plus/Plus Query 250 CACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCCTT 309 |||||||||||||||||| || ||||| || || || || || |||||||||||||| Sbjct 1 CACCCAGGTGTCCTTGGTGCCGCCGCCCTGGGAGGAATTCACCACCAGCGAGCCTTCGCG 60 Query 310 CAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGT-TTCCTTGCCC-GAGAGCACG 367 ||| || || ||||||| |||||| ||||||||||| || || | |||| || |||||| Sbjct 61 CAGGGCGACCCGGGTCAGGCCACCAGGCACCAGGCGCGTCTTGC--GCCCGGACAGCACG 118 Query 368 AAGGGTCGCAAGTCG 382 ||||| |||| |||| Sbjct 119 AAGGGCCGCAGGTCG 133 >seq83018 Length=671 Score = 107 bits (118), Expect = 4e-21 Identities = 129/174 (74%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 164 GCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTGT 223 ||| || | ||| ||||| ||||| | || || ||||||| || || | || || Sbjct 207 GCGCGCGATGTTTTCGGCACGCTCGATATAGCGGAACATCCAGTAGAGCCCGTTTGCAGT 148 Query 224 TCTACGCAGCATA-CTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGA 282 ||| | || ||| ||||| |||||| ||||||||||| ||||| || || ||||| Sbjct 147 TCTTCCCAACATGGCTCAGTCCTCCAGTACCCAGGTGTCTTTGGTGCCGCCACCTTGGCT 88 Query 283 CGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGG 336 || |||||||| ||||| || | ||| || ||||||||||||||||| || || Sbjct 87 GGAATTGACGACGAGCGATCCCTGCTTGAGGGCCACGCGGGTCAAGCCGCCTGG 34 >seq83017 Length=671 Score = 107 bits (118), Expect = 4e-21 Identities = 129/174 (74%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 164 GCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTGT 223 ||| || | ||| ||||| ||||| | || || ||||||| || || | || || Sbjct 207 GCGCGCGATGTTTTCGGCACGCTCGATATAGCGGAACATCCAGTAGAGCCCGTTTGCAGT 148 Query 224 TCTACGCAGCATA-CTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGA 282 ||| | || ||| ||||| |||||| ||||||||||| ||||| || || ||||| Sbjct 147 TCTTCCCAACATGGCTCAGTCCTCCAGTACCCAGGTGTCTTTGGTGCCGCCACCTTGGCT 88 Query 283 CGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGG 336 || |||||||| ||||| || | ||| || ||||||||||||||||| || || Sbjct 87 GGAATTGACGACGAGCGATCCCTGCTTGAGGGCCACGCGGGTCAAGCCGCCTGG 34 >seq72681 Length=832 Score = 107 bits (118), Expect = 4e-21 Identities = 129/174 (74%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 164 GCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTGT 223 ||| || | ||| ||||| ||||| | || || ||||||| || || | || || Sbjct 163 GCGCGCGATGTTTTCGGCACGCTCGATATAGCGGAACATCCAGTAGAGCCCGTTTGCAGT 222 Query 224 TCTACGCAGCATA-CTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGA 282 ||| | || ||| ||||| |||||| ||||||||||| ||||| || || ||||| Sbjct 223 TCTTCCCAACATGGCTCAGTCCTCCAGTACCCAGGTGTCTTTGGTGCCGCCACCTTGGCT 282 Query 283 CGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGG 336 || |||||||| ||||| || | ||| || ||||||||||||||||| || || Sbjct 283 GGAATTGACGACGAGCGATCCCTGCTTGAGGGCCACGCGGGTCAAGCCGCCTGG 336 >seq128400 Length=401 Score = 104 bits (114), Expect = 5e-20 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 258 TGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCA 317 |||||||||| || ||||| |||||||| ||||| |||||||||||||| |||||| | Sbjct 130 TGTCCTTGGTCCCGCCGCCCTGCGACGAATTGACCACCAGCGAGCCTTCGCGCAGCGCGA 189 Query 318 CGCGGGTCAAGCCACCGGGCAC 339 ||||||||| |||||||||||| Sbjct 190 CGCGGGTCAGGCCACCGGGCAC 211 >seq83016 Length=1082 Score = 104 bits (114), Expect = 5e-20 Identities = 128/174 (74%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 164 GCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTGT 223 ||| || | ||| ||||| ||||| | || || ||||||| || || | || || Sbjct 695 GCGCGCGATGTTTTCGGCACGCTCGATATAGCGGAACATCCAGTAGAGCCCGTTTGCAGT 636 Query 224 TCTACGCAGCATA-CTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGA 282 ||| | || ||| ||||| |||||| ||||||||||| ||||| || || || || Sbjct 635 TCTTCCCAACATGGCTCAGTCCTCCAGTACCCAGGTGTCTTTGGTGCCGCCACCCTGGCT 576 Query 283 CGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGG 336 || |||||||| ||||| || | ||| || ||||||||||||||||| || || Sbjct 575 GGAATTGACGACGAGCGATCCCTGCTTGAGGGCCACGCGGGTCAAGCCGCCTGG 522 >seq63936 Length=243 Score = 82.4 bits (90), Expect = 2e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 293 ACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCAGGCGGGTTTCC 352 |||||||||||||| ||| |||||||| |||| ||| |||||||||||||||||||| Sbjct 242 ACCAGCGAGCCTTCGCGCAGTGCCACGCGCGTCAGGCCGCCGGGCACCAGGCGGGTTTCG 183 Query 353 TTGCCCGAGAGCACGAAGGGTCGCAAGTCG 382 || | || ||||| || |||| |||| Sbjct 182 CGACCGGTCAGGACGAACGGGCGCAGGTCG 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1118540640000