Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq6009 399 5e-109 seq9843 347 3e-93 seq9842 277 4e-72 seq4371 241 3e-61 seq42306 203 8e-50 seq44237 163 7e-38 seq62951 145 2e-32 seq9272 113 1e-22 seq94560 73.4 1e-10 >seq6009 Length=607 Score = 399 bits (442), Expect = 5e-109 Identities = 327/396 (83%), Gaps = 1/396 (0%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||||| |||| || ||||||| || Sbjct 199 AAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTAATCG 258 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| | |||||||||| || ||||| || |||||| | || Sbjct 259 GAATTACTGGGCGTAAAGCGCGCGTAGGTGGCTTGATAAGTTGGATGTGAAATCCCCGGG 318 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| || ||||| | |||||| ||||||||||| | || || |||||||| Sbjct 319 CTCAACCTGGGAACTGCATCCAAAACTGTCTGGCTAGAGTGCGGTAGAGGGTAGTGGAAT 378 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||||||||||||||||||||||||||| | |||||||||||||||||||||| || Sbjct 379 TTCCAGTGTAGCGGTGAAATGCGTAGATATTGGAAGGAACACCAGTGGCGAAGGCGACTA 438 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 439 CCTGGACTGACACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 498 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 |||||||||||||||||||||||| ||||| || ||| | | || || ||| Sbjct 499 TGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGATCCTTGAGATCT-TAGTGG 557 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| |||||| ||||| || ||||||||||| Sbjct 558 CGCAGCTAACGCATTAAGTTGACCGCCTGGGGAGTA 593 >seq9843 Length=337 Score = 347 bits (384), Expect = 3e-93 Identities = 280/337 (83%), Gaps = 1/337 (0%) Strand=Plus/Minus Query 72 GGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATG 131 ||||||||||||||||||| | |||||| || || |||||||| |||||||| || Sbjct 337 GGAATTACTGGGCGTAAAGCGCACGTAGGCGGCTTTGTAAGTCAGGGGTGAAAGCCTGGA 278 Query 132 GCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191 ||||||| || | ||||| ||||| |||||| ||| || | | |||| || |||||||| Sbjct 277 GCTCAACTCCAGAACTGCCTTTGAGACTGCATCGCTTGAATCCGGGAGAGGTAAGTGGAA 218 Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251 |||| ||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct 217 TTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAAGAACACCAGTGGCGAAGGCGGCT 158 Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311 | |||||| | | |||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 157 TACTGGACCGGGATTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 98 Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTG 371 |||||||||||||||||||||||||| ||||| |||| ||| | | || | |||| Sbjct 97 CTGGTAGTCCACGCCGTAAACGATGATAACTAGCTGTCCGGG-GACTTGGTCTTTGGGTG 39 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| |||||| ||||| ||| ||||||||||| Sbjct 38 GCGCAGCTAACGCATTAAGTTATCCGCCTGGGGAGTA 2 >seq9842 Length=339 Score = 277 bits (306), Expect = 4e-72 Identities = 262/329 (80%), Gaps = 4/329 (1%) Strand=Plus/Minus Query 80 TGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139 ||||| ||| | |||||||||| || ||||| || |||||| | | ||||||| Sbjct 339 TGGGCAGTAAGCGCGCGTAGGTGGCTTGATAAGTTGGATGTGAAATCCCG-GACTCAACC 281 Query 140 CCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGT 199 || ||||| | |||||| ||||||||||| | || || ||||||||| | ||| Sbjct 280 TGGGAACTGCATCC-AAACTGTCTGGCTAGAGTGCGGTAGAGGGTAGTGGAATTTCCAGT 222 Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259 ||||||||||||||||||| |||| | |||||||||||||||||||||| || |||||| Sbjct 221 GTAGCGGTGAAATGCGTAG-TATTGGAAGGAACACCAGTGGCGAAGGCGACTACCTGGAC 163 Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 162 TGACACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 103 Query 320 CCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGCA 379 ||||||||||||||||| ||||| || ||| | | || || ||| |||||| Sbjct 102 CCACGCCGTAAACGATGTCAACTAGCCGTTGGGATCCTTGAGATCT-TAGTGGCGCAGCT 44 Query 380 AACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| ||||| || ||||||||||| Sbjct 43 AACGCATTAAGTTGACCGCCTGGGGAGTA 15 >seq4371 Length=734 Score = 241 bits (266), Expect = 3e-61 Identities = 205/249 (82%), Gaps = 4/249 (2%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGC-AGCCGCGGTAATACGTAGGGGG 59 ||| |||| || ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 246 TACCTGAGAAGAAAGCCCCGGCTAACTACGTGCCAGCCAGCCGCGGTAATACGTAGGGGG 187 Query 60 CTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGG 119 | |||||| |||||||||| ||||||||||| | ||| ||| || ||||||| | | Sbjct 186 CAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGCCGTTTAAGTCCGGTG 127 Query 120 TGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAG 179 | || | ||||||| |||| | || | ||||||| |||||| |||||||| || Sbjct 126 TTTAATCCCGAAGCTCAACTTCGGGTC-GCACTGGAAACTGGAGGGCTTGAGTGCAGAAG 68 Query 180 GGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTG 239 || ||||||||||| ||||||||||||||||||||||| | ||||||||||||||| Sbjct 67 AGGAGAGTGGAATTCCACGTGTAGCGGTGAAATGCGTAGATGT--GGAGGAACACCAGTG 10 Query 240 GCGAAGGCG 248 ||||||||| Sbjct 9 GCGAAGGCG 1 >seq42306 Length=487 Score = 203 bits (224), Expect = 8e-50 Identities = 217/281 (77%), Gaps = 8/281 (3%) Strand=Plus/Plus Query 131 GGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAG--GAGGGGCAAGTG 188 ||||||||| || ||||| |||| |||||| ||| |||| | | |||||| | || Sbjct 14 GGCTCAACCTGGGAACTGCATTTGTGACTGCATCGCTGGAGTACGGCAGAGGGGGA--TG 71 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||||| ||||||| ||||||||||||||||| ||||||||||| |||||||||| Sbjct 72 GAATTCCGCGTGTAGCAGTGAAATGCGTAGATATGCGGAGGAACACCGATGGCGAAGGCA 131 Query 249 GCTTGCTGGAC-TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307 |||| | |||| ||||| || | || ||||||||||||||||||||||||||||| Sbjct 132 ATCCCCTGGGCCTGTA-CTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 190 Query 308 TACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCC 367 ||||||||||||||||||| ||||||||| ||| | ||| ||| | | | || | Sbjct 191 TACCCTGGTAGTCCACGCCCTAAACGATGTCAACTGGTTGTTGGG--TCTTCACTGACTC 248 Query 368 GGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || || ||| ||||| |||| || ||||||||||| Sbjct 249 AGTAACGAAGCTAACGCGTGAAGTTGACCGCCTGGGGAGTA 289 >seq44237 Length=356 Score = 163 bits (180), Expect = 7e-38 Identities = 159/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| || || ||||| ||||| ||||||||||||||||||||||||||||| |||| || Sbjct 152 TACCTGCAGAAGAAGCACCGGCCAACTACGTGCCAGCAGCCGCGGTAATACGGAGGGTGC 211 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 |||||| |||||||||| ||||||||||| | |||||| ||||| | ||| | || Sbjct 212 AAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGTTTGTCGCGTCTGCTGT 271 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 |||| | ||||||||| |||| ||| | | || | | ||||||||| | ||| Sbjct 272 GAAATCCCGAGGCTCAACCTCGGGCTTGCAGTGGGTACGGGCAGACTAGAGTGCGGTAGG 331 Query 181 GGCAAGTGGAATTCCTAGTGTAGCG 205 || | |||||||||| |||||||| Sbjct 332 GGAGATTGGAATTCCTGGTGTAGCG 356 >seq62951 Length=227 Score = 145 bits (160), Expect = 2e-32 Identities = 155/198 (78%), Gaps = 9/198 (5%) Strand=Plus/Minus Query 218 GATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGC 277 ||||| |||||||||||| ||||||||||||| | |||| | | ||||| |||||| Sbjct 227 GATATCAGGAGGAACACCGGTGGCGAAGGCGGTTCTCTGGGCATTTCCTGACGCTGAGGA 168 Query 278 TCGAAAGCGTGGGGAGCAAACAGGA--TTAGATACCCT-GGTAGTCCACG-CCGTAAACG 333 |||||| ||||||||| ||||||| | ||||||||| ||||||||||| ||||||||| Sbjct 167 GCGAAAGTGTGGGGAGCGAACAGGAATTAAGATACCCTGGGTAGTCCACGACCGTAAACG 108 Query 334 ATGAATACTAGGTGTCGGGGCGCAT---AAGTGCTCCGGTGCCGCAGCAAACGCAATAAG 390 || |||||||| ||| ||| | | | ||| |||||||||| |||||| |||| Sbjct 107 TTGGGCGCTAGGTGT-GGGATCCATTCCACGGGTTCC-GTGCCGCAGCTAACGCATTAAG 50 Query 391 TATTCCACCTGGGGAGTA 408 || ||||||||||| Sbjct 49 CGCCCCGCCTGGGGAGTA 32 >seq9272 Length=831 Score = 113 bits (124), Expect = 1e-22 Identities = 97/115 (84%), Gaps = 5/115 (4%) Strand=Plus/Minus Query 225 GGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACA-CTGAGGCTCGAAA 283 ||||||| ||| |||||||||||||| |||||| |||||| || || | ||| Sbjct 827 GGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACGAAGACTGACGGCTCAG--TGCAAA 770 Query 284 GCGTGGGGAGCAAA-CAGGATTAGATACCCTGGTAG-TCCACGCCGTAAACGATG 336 |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 769 GCGTGGGGAGCAAAGCAGGATTAGATACCCTGGTAGTTCCACGCCGTAAACGATG 715 >seq94560 Length=613 Score = 73.4 bits (80), Expect = 1e-10 Identities = 68/85 (80%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 131 GGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGA 190 ||||||||| || ||||| | |||||| ||||||||||| | || || |||||| Sbjct 609 GGCTCAACCTGGGAACTGCATCC-AAACTGTCTGGCTAGAGTGCGGTAGAGGGTAGTGGA 551 Query 191 ATTCCTAGTGTAGCGGTGAAATGCG 215 ||| | ||||||||||||||||||| Sbjct 550 ATTTCCAGTGTAGCGGTGAAATGCG 526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201632230400