Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq956 526 4e-147 seq587 452 7e-125 seq600 360 4e-97 seq3669 309 6e-82 seq35765 233 4e-59 seq83552 181 2e-43 >seq956 Length=2258 Score = 526 bits (582), Expect = 4e-147 Identities = 302/309 (98%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1525 GAACGAGACCTTAACCTGCTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 1466 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1465 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 1406 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1405 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCTTCACCTTGGCCG 1346 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1345 AAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 1286 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1285 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCATGCGTTGATTACGTCCCTG 1226 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 1225 CCCTTTGTA 1217 >seq587 Length=3399 Score = 452 bits (500), Expect = 7e-125 Identities = 287/309 (93%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | |||||||||||||| Sbjct 1403 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 1344 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1343 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 1284 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||| |||||| ||||| | || ||||||||| Sbjct 1283 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTAC-TC-CCTTGGCCG 1226 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1225 GAAGGCCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 1166 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 1165 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 1106 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 1105 CCCTTTGTA 1097 >seq600 Length=4933 Score = 360 bits (398), Expect = 4e-97 Identities = 267/310 (86%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||| |||||||||||| | || ||| |||| || || | |||||||| Sbjct 3939 GAACGAGACCTTCTCCTGCTAAATAGTCCAGCTGGCTATGGCTGGCTGCTGACTTCTTAG 3880 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| | | || |||||||||| |||||||||||||||||||||||||||| Sbjct 3879 AGGGACTATCAACGTTTAGTTGATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTT 3820 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| | Sbjct 3819 AGATGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATATCACCTTATCT 3760 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | ||| | |||||||||||| ||||| |||||| |||||||||||||||||||||||| Sbjct 3759 GAAAGAT--GGGTAATCTTGTGAAACTTGGTCGTGATGGGGATAGAGCATTGCAATTATT 3702 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||| Sbjct 3701 GCTCTTCAACGAGGAATACCTAGTAAGCGTATGTCATCAGCATGCGTTGATTATGTCCCT 3642 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 3641 GCCCTTTGTA 3632 >seq3669 Length=474 Score = 309 bits (342), Expect = 6e-82 Identities = 229/264 (87%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | || || ||| | |||||||||||||||||||||| Sbjct 74 GCCAGCTTCTTAGAGGGACTATGGCCGCCCAGGCC-ACGGAAGTTTGAGGCAATAACAGG 132 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 133 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 192 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| Sbjct 193 CTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGA 251 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct 252 TCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCG 311 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||| Sbjct 312 TTGACTACGTCCCTGCCCTTTGTA 335 >seq35765 Length=836 Score = 233 bits (258), Expect = 4e-59 Identities = 201/249 (81%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84 |||||||||||| ||||||||| |||| ||||| || ||||||||||||||||||||| Sbjct 249 AGACCTTAACCTACTAAATAGCTAGGCTAGCTTTAGCTAGTCGCCGGCTTCTTAGAGGGA 190 Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144 |||| ||| |||| || ||||||| ||| ||||| |||||| | || ||||||||| | Sbjct 189 CTATTAGCTTAAGCTAATAGAAGTTTAAGGTAATAATAGGTCTATAATACCCTTAGATAT 130 Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204 ||| ||| |||||||||||| ||| | ||||| || ||||| | ||||| || |||| Sbjct 129 TCTAGGCTGCACGCGCGCTATACTAATAGAGCTAATAAGTTCTTTACCTTAGCTAAAAGG 70 Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264 ||| ||||||||| ||||||||| | | || ||||||||| ||| ||||||| ||||| Sbjct 69 TCTAGGTAATCTTATTAAACTCTATTATACTAGGGATAGAGTATTATAATTATTACTCTT 10 Query 265 CAACGAGGA 273 || |||| Sbjct 9 TAATAAGGA 1 >seq83552 Length=550 Score = 181 bits (200), Expect = 2e-43 Identities = 144/168 (86%), Gaps = 5/168 (3%) Strand=Plus/Plus Query 162 CTACACTGACAGAG-CCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTT 220 |||||||||| || ||| | ||| |||||||| | | ||| | |||||||||||| Sbjct 1 CTACACTGACCAAGTCCAGCAAGTATATCACCTTATCTGAAAGAT--GGGTAATCTTGTG 58 Query 221 AAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTA 280 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 59 AAACTTGGTCGTGATGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATACCTA 118 Query 281 GTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| ||||||||||| ||||||||| ||||||||||||||||| Sbjct 119 G-AAGCGTATGTCATCAGCATGCGTTGATT-CGTCCCTGCCCTTTGTA 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945965798400