Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq39714 235 2e-59 seq7670 214 6e-53 seq52867 210 7e-52 seq90617 181 4e-43 seq59592 168 2e-39 seq39713 156 1e-35 seq7671 147 7e-33 seq52141 104 8e-20 seq42980 84.2 7e-14 >seq39714 Length=362 Score = 235 bits (260), Expect = 2e-59 Identities = 271/356 (76%), Gaps = 9/356 (3%) Strand=Plus/Plus Query 37 CCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGT 96 ||||||||| | |||||| |||| |||||||||||||| |||||||| | |||||||| Sbjct 1 CCCGAAACCCGGCGATCTATGCATGACCAGGATGAAGGTGTGGTAACACACACTGGAGGT 60 Query 97 CCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAA 156 ||||||| | ||| |||||||| ||| ||||||| |||| |||||||||||||| || Sbjct 61 CCGAACCGATTAACGTTGAAAAGTTACCGGATGAGTTGTGCTTAGGGGTGAAAGGCCAAT 120 Query 157 CAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCA 214 ||| | ||||||||||||||||| ||||||||||| |||||||||||| | | | || Sbjct 121 CAAGCCGGGAAATAGCTGGTTCTCCGCGAAAACTATTGAGGTAGTGCCTCGGATGGA-CA 179 Query 215 CCATCGGGGGTAGAGCACTGTTATGGCT-AGGGGGTCATTGCGACTTACCAAACCATTGC 273 || | ||||||||||||||| |||| | ||||||| | || |||||| | | Sbjct 180 CCCTGGGGGGTAGAGCACTG-GATGGATGCGGGGGTC-GCGAGATCTACCAACTCTAACC 237 Query 274 AAACTCCGAATGCGCATCAGTTTTA-CCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGT 332 ||||||||||| | | ||| || ||| | || || ||| |||||||||||||||| Sbjct 238 AAACTCCGAATACCTAGGAGTGATATCCGGGAGACAGACGGC--GGGTGCTAAGGTCCGT 295 Query 333 GCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT 388 | | ||| || | || ||| ||||||||| ||| || | || |||||| Sbjct 296 CGTCAAAAGGGAAACAGCCCTGACCTACAGCTAAGGTCCCCAAGTCACGTCTAAGT 351 >seq7670 Length=301 Score = 214 bits (236), Expect = 6e-53 Identities = 189/234 (81%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | |||||||||| ||||||||||||| | |||||| |||| Sbjct 232 CGAGTCTTAATAGGGCGTCTAGTCGCTGGGAATAGACCCGAAACCGGGCGATCTATCCAT 173 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||||| | ||||||| ||||||| ||||||||||| |||||||| Sbjct 172 GAGCAGGTTGAAGTAG--GTAACACTGACTGGAGGACCGAACCCACTTCCGTTGAAAAGG 115 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||| ||||| | || |||||||||||| ||| || ||| ||||||||||||| Sbjct 114 CAGGGGATGACTTGTGGATCGGAGTGAAAGGCTAATCAAGCTCGGAGATAGCTGGTTCTC 55 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTG 234 ||||| |||||||||||| |||||| ||||||| | ||||||||||||||| Sbjct 54 CTCGAAAGCTATTTAGGTAGCGCCTCATGTATCACTCTGGGGGGTAGAGCACTG 1 >seq52867 Length=861 Score = 210 bits (232), Expect = 7e-52 Identities = 172/207 (83%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||||||||||| ||| |||| || |||||| ||||||||| ||| | ||| ||||| Sbjct 2 ATCAGCTAAGGTCCCCAAATTACTATTAAGTTGAACTAACGAGGTCCGGCTGCACAGACA 61 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 121 Query 478 GAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT-CA 536 ||| | ||||| |||||||||| |||| ||||| | || ||||||||| ||| | || Sbjct 122 GAGCGGCCGGGCATGGATAATAAACGGGCATTAAATAGTATACCGAAGCTATGGATTACA 181 Query 537 TTTATATG---ATCGGTAGGGGAGCAT 560 || || | | ||||||||||||| Sbjct 182 CTTTTAAGTGTACTGGTAGGGGAGCAT 208 >seq90617 Length=344 Score = 181 bits (200), Expect = 4e-43 Identities = 247/334 (74%), Gaps = 18/334 (5%) Strand=Plus/Minus Query 4 AGTCCGAACAGGGCGACAGTCGC---TGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||| ||| ||||||||| | | ||| |||||||||||||| ||||||||||| | Sbjct 344 AGTCTGAATAGGGCGACATTAGTACGTGGACGTAGACCCGAAACCGGGTGATCTACCC-T 286 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | ||||||||||||| |||||||||| |||||||||||||||||| | |||||||| | Sbjct 285 GTCCAGGATGAAGGTACGGTAACACGTACTGGAGGTCCGAACCCACGCACGTTGAAAAGT 226 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||| || |||||| || |||| | || | |||| ||| |||||||||||| Sbjct 225 GCGGGGATGAGGTGGGGGTAGCGGAGAAATTCCAATCGAACTCGGAGATAGCTGGTTCT- 167 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTAT 238 ||| |||||| ||||| ||| || | ||| |||||||||||| | | Sbjct 166 ----AAATAGCTTTAGGGCTAGCCTCGGAAG-ATGAGTCGCGGAGGTAGAGCACTGAT-T 113 Query 239 GGCTAGGGGGTCATTGCGACTTACCAAAC-CATTGCAAACTCCGAATG-CGCATCAGTTT 296 || | |||| | | ||||||| | || | ||||||||||||| |||| || Sbjct 112 GGGTGCGGGGCCCGCAAGGGTTACCAAGCTCAGT-CAAACTCCGAATGCCGCA--GACTT 56 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCC 330 || ||||||| || ||||||||||||||| Sbjct 55 TATTCCGGGAGTCAGACAGTGGGTGCTAAGGTCC 22 >seq59592 Length=613 Score = 168 bits (186), Expect = 2e-39 Identities = 145/179 (81%), Gaps = 3/179 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGC---TGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 |||||| ||| ||||||||| | | ||| |||||||||||||| ||||||||||| Sbjct 179 CGAGTCTGAATAGGGCGACATTAGTACGTGGACGTAGACCCGAAACCGGGTGATCTACCC 120 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 || ||||||||||||| |||||||||| |||||||||||||||||| | |||||||| Sbjct 119 CTGTCCAGGATGAAGGTACGGTAACACGTACTGGAGGTCCGAACCCACGCACGTTGAAAA 60 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTT 177 | ||||||||| || |||||| || |||| | || | |||| ||| |||||||||| Sbjct 59 GTGCGGGGATGAGGTGGGGGTAGCGGAGAAATTCCAATCGAACTCGGAGATAGCTGGTT 1 >seq39713 Length=308 Score = 156 bits (172), Expect = 1e-35 Identities = 227/311 (73%), Gaps = 11/311 (4%) Strand=Plus/Plus Query 126 GATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGA 185 |||||| |||| |||||||||||||| || ||| | ||||||||||||||||| ||| Sbjct 1 GATGAGTTGTGTTTAGGGGTGAAAGGCCAATCAAGCCGGGAAATAGCTGGTTCTCCGCGA 60 Query 186 AAACTATTTAGGTAGTGCCTCAAG-TATCACCATCGGGGGTAGAGCACTGTTATGGCT-A 243 |||||||| |||||||||||| || | ||| | ||||||||||||||| |||| | Sbjct 61 AAACTATTGAGGTAGTGCCTCGAGCGAATACCGTAGGGGGTAGAGCACTG-GATGGATGC 119 Query 244 GGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC-CGC 302 ||||||| | || |||||| || |||||||||||| | || ||| ||| || Sbjct 120 GGGGGTC-GCGAGATCTACCAACCCTAACCAAACTCCGAATACCCACGAGTACTACTCGG 178 Query 303 GGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAG 362 | || || ||| |||||||||||||||| | ||||| || | || ||| ||| Sbjct 179 GAGACAGACGGC--GGGTGCTAAGGTCCGTCGTCAAGAGGGAAACAGCCCTGACCTACAG 236 Query 363 CTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAG 422 |||||| ||| || | || |||||| | || | || || | | || ||| | || Sbjct 237 CTAAGGTCCC-AAGTCACGTCTAAGTGGA---AAGCATGTGGGAATCCCAAAACAACCAG 292 Query 423 GATGTTGGCTT 433 || |||||||| Sbjct 293 GAGGTTGGCTT 303 >seq7671 Length=245 Score = 147 bits (162), Expect = 7e-33 Identities = 142/179 (79%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | |||||||||| ||||||||||||| | |||||| |||| Sbjct 176 CGAGTCTTAATAGGGCGTCTAGTCGCTGGGAATAGACCCGAAACCGGGCGATCTATCCAT 117 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||| || |||||||| ||||||| ||||||||||| |||||||| Sbjct 116 GAGCAGGTTGA--GTA-GGTAACACTGACTGGAGGACCGAACCCACTTCCGTTGAAAAGG 60 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 ||||||||| ||||| | || |||||||||||| ||| || ||| |||||||||||| Sbjct 59 CAGGGGATGACTTGTGGATCGGAGTGAAAGGCTAATCAAGCTCGGAGATAGCTGGTTCT 1 >seq52141 Length=225 Score = 104 bits (114), Expect = 8e-20 Identities = 125/163 (77%), Gaps = 8/163 (5%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCG-ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | |||||| || ||||||| |||||| |||||||| ||| Sbjct 63 CGAGTCTGATAAGGGCGCATAGTCGCGGGCAGTAGACC-GAAACCGGGTGATCTAGTCAT 121 Query 61 GGCCAGGATG-AAGGTGC-GGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 | ||||| || ||||| | |||| | ||||||| ||||||||||| |||| ||| Sbjct 122 GCCCAGGGTGGAAGGTCCAGGTA---CTGACTGGAGGCCCGAACCCACTCCCGTTGCAAA 178 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAAC 161 ||||||||||| |||| |||| |||||| ||||| | ||| Sbjct 179 GGTAGGGGATGAGGTGTGATTAGGAGTGAAA-GCTAATCGAAC 220 >seq42980 Length=269 Score = 84.2 bits (92), Expect = 7e-14 Identities = 187/271 (69%), Gaps = 11/271 (4%) Strand=Plus/Plus Query 167 AATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGG 224 |||||||||||||| |||||| |||||| ||||| ||| || | ||| || Sbjct 6 AATAGCTGGTTCTCCCCGAAATAGCTTTAGGGCTAGCCTCGGAAG-ATGAGTCGCGGAGG 64 Query 225 TAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAAC-CATTGCAAACTCCGAA 283 |||||||||| | ||| | |||| | | ||||||| | || | ||||||||||| Sbjct 65 TAGAGCACTGAT-TGGGTGCGGGGCCCGCAAGGGTTACCAAGCTCAGT-CAAACTCCGAA 122 Query 284 TGCGCATCAGT-TTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGG 342 ||| ||| |||| ||||||| || ||||||||||||||| | | | ||| Sbjct 123 TGCCG--CAGACTTTATTCCGGGAGTCAGACAGTGGGTGCTAAGGTCCATTGTCAAAAGG 180 Query 343 AGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGT 402 || | || ||| ||||||||||| ||| || || | ||||| | || || || Sbjct 181 GAAACAGCCCAGACCATCAGCTAAGGTCCCCAAGTGTGTGTTAAGTGGGA--AAGGATGT 238 Query 403 CTGATTGCTAAGACAGCTAGGATGTTGGCTT 433 |||| ||||| | ||||||||||||| Sbjct 239 GAAGTTGCACAGACAACCAGGATGTTGGCTT 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1687398451200