Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq28202 210 4e-52 seq5275 210 4e-52 seq31251 138 2e-30 seq43016 129 1e-27 seq129633 107 4e-21 seq66439 107 4e-21 seq81880 96.9 6e-18 seq68118 75.2 2e-11 >seq28202 Length=898 Score = 210 bits (232), Expect = 4e-52 Identities = 245/323 (76%), Gaps = 11/323 (3%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| |||||||||||||||| | | |||||||||||||||| | ||| ||||| | Sbjct 518 AGCGCACACGGTGGATGCCTTGGCGGTCAGAGGCGATGAAGGACGTGGCAGCCTGCGAAA 577 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 || ||||||| |||| || |||||||||| || ||||||||||||||||| Sbjct 578 AGTGTCGGGGAGCTGGCAA-CAAGCTTTGATCCGGCAATGTCCGAATGGGGAAACCCACT 636 Query 121 CCTTTGGGTCATTG-CATGC--TGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGA 177 ||| || || | | ||| ||||||||||| | |||||||| ||| ||||||| Sbjct 637 GCTTCGG--CAGTATCCTGCAGTGAATACATAGCTGCTGGAAGCGAACCCGGTGAACTGA 694 Query 178 AACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGA 237 || ||||||||| | | |||||||||||||||||||||||||| |||||||| ||||||| Sbjct 695 AATATCTAAGTAACCGGAGGAAAAGAAATCAACCGAGATTCCCTAAGTAGTGACGAGCGA 754 Query 238 AATGGGATGAGCCTTTACGAGATAGT-TGAATTGATAGTGGAATCCTCTGGAAATAGGAG 296 | |||| |||| ||| || | || || || ||| || ||||||| | Sbjct 755 ACGGGGACTAGCCCTTA--AGCTGGTATGGTTT--TAGAAAAACAACCTGGAAAGGTTGG 810 Query 297 CCATAGCGGGTGATAGCCCCGTA 319 |||||| ||||||||||| ||| Sbjct 811 CCATAGAAGGTGATAGCCCTGTA 833 >seq5275 Length=552 Score = 210 bits (232), Expect = 4e-52 Identities = 245/328 (75%), Gaps = 16/328 (5%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | | |||||||||| ||||| |||| ||||||| Sbjct 517 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGATAGCCTGCGATA 458 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||| ||| ||||| || ||| ||| |||| || |||||||| ||||| | Sbjct 457 AGCTTCGGTGAGGTGGCAAATGACCTGTGACCCGGAGATCTCTGAATGGGGGAACCCACC 398 Query 121 C--CTT----TGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAAC 174 | | | ||| || | |||||| |||||| | | |||||| || |||| Sbjct 397 TAGCATAAGCTAGGT-ATCTTAACCTGAATCCATAGGGTTAAGAGGCGAACCAGGGGAAC 339 Query 175 TGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAG 234 ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| Sbjct 338 TGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAG 279 Query 235 CGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAAT 291 |||| |||| |||| ||| |||||| |||| ||| |||| ||||||||| Sbjct 278 CGAACGGGGACCAGCCCTTA------AGTTGATTTGAGAGTAGCGGAACGCTCTGGAAAG 225 Query 292 AGGAGCCATAGCGGGTGATAGCCCCGTA 319 | ||||||| |||||||||||| ||| Sbjct 224 TGCGGCCATAGTGGGTGATAGCCCTGTA 197 >seq31251 Length=882 Score = 138 bits (152), Expect = 2e-30 Identities = 147/187 (79%), Gaps = 8/187 (4%) Strand=Plus/Plus Query 136 ATGCTGAATACATAGGTATGCA-AAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGC 194 || |||||||||||||| | | |||||||| ||| |||||||||||||| |||||| | Sbjct 634 ATACTGAATACATAGGTTTCGAGAAGCGAACCCGGTGAACTGAAACATCTCAGTAGCCGG 693 Query 195 AGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGA-GCCTTT 253 ||||||||| ||||||||||||||| |||||||||||||||| ||| | ||| | Sbjct 694 AGGAAAAGACATCAACCGAGATTCCGTTAGTAGTGGCGAGCGAACGCGGACCAGGCCAGT 753 Query 254 ACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAA-TAGGAGCCATAGCGGGTGATAG 312 | || | || || ||| ||| | |||||||| |||| ||| |||||||||| || Sbjct 754 GCCTGACA-TTCAA---CTAGCAGAAGCTTCTGGAAAGTAGG-GCCGTAGCGGGTGACAG 808 Query 313 CCCCGTA 319 ||||||| Sbjct 809 CCCCGTA 815 Score = 120 bits (132), Expect = 6e-25 Identities = 93/110 (85%), Gaps = 7/110 (6%) Strand=Plus/Plus Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG-- 68 ||||||||||||||| ||||||||||||||||||| | | ||||||||||||||| Sbjct 437 GTGGATGCCTTGGCGCATACAGGCGATGAAGGACGTGGCACGCTGCGATAAGCTGCGGTG 496 Query 69 -GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 || |||||||| |||||| |||||||||||||||||||||||||| Sbjct 497 AGGTGTGAGCAA----CCTTTGACCCGCAGATTTCCGAATGGGGAAACCC 542 >seq43016 Length=877 Score = 129 bits (142), Expect = 1e-27 Identities = 141/183 (77%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 139 CTGAATACATAGGTATGCA-AAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 |||||||||||||| | | |||||||| ||| |||||||||||||| |||| ||| ||| Sbjct 636 CTGAATACATAGGTTTCGAGAAGCGAACCCGGGGAACTGAAACATCTCAGTACCTGGAGG 695 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGA-GCCTTTACG 256 |||||| ||||||||||||||| |||||||||||||||| ||| | ||| | | Sbjct 696 AAAAGACATCAACCGAGATTCCGTTAGTAGTGGCGAGCGAACGCGGACCAGGCCAGTGCC 755 Query 257 AGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCC 316 | | || || ||| ||| ||||||||| | ||| |||||||||| |||||| Sbjct 756 A-TTCATTCAA---GTAGCAGAACACTCTGGAAAGTGTGGCCGTAGCGGGTGACAGCCCC 811 Query 317 GTA 319 ||| Sbjct 812 GTA 814 Score = 120 bits (132), Expect = 6e-25 Identities = 93/110 (85%), Gaps = 7/110 (6%) Strand=Plus/Plus Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG-- 68 ||||||||||||||| ||||||||||||||||||| | | ||||||||||||||| Sbjct 432 GTGGATGCCTTGGCGCATACAGGCGATGAAGGACGTGGCACGCTGCGATAAGCTGCGGTG 491 Query 69 -GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 || |||||||| |||||| |||||||||||||||||||||||||| Sbjct 492 AGGTGTGAGCAA----CCTTTGACCCGCAGATTTCCGAATGGGGAAACCC 537 >seq129633 Length=367 Score = 107 bits (118), Expect = 4e-21 Identities = 136/185 (74%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 136 ATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGT-AGCTGC 194 || ||||||||||||| || ||||| ||| ||| |||||||||||||||||| | | | Sbjct 102 ATCCTGAATACATAGGGATCAAAAGCAAACCCGGGGAACTGAAACATCTAAGTAACCCGG 161 Query 195 AGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTTA 254 |||||| || |||||| |||| ||| |||||||||||||||| ||| || | | Sbjct 162 AGGAAAGGACATCAACAGAGACTCCGTTAGTAGTGGCGAGCGAACGCGGACCAGGC--CA 219 Query 255 CGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCC 314 | | ||| || | || ||| | |||||||| | || | |||||||||||| Sbjct 220 GTGGCTTGTTTAAGAAAGAGCAGAACCGTCTGGAAAGTCGGGCACGATCGGGTGATAGCC 279 Query 315 CCGTA 319 ||||| Sbjct 280 CCGTA 284 >seq66439 Length=429 Score = 107 bits (118), Expect = 4e-21 Identities = 143/191 (75%), Gaps = 12/191 (6%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTA-CAGGCGATGAAGGACGTAGTAGCTTGCGAT 59 || || |||||||||||||||||| || | || ||||||||||||| | ||| |||| | Sbjct 243 AGGGCGCATGGTGGATGCCTTGGC-ATCAGGAGCCGATGAAGGACGTGGGAGCCTGCGTT 301 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 |||| |||||||| |||| | || |||||||| | | ||||||||||||| |||| Sbjct 302 AAGCCTCGGGGAGTTGGCAACCGAACGTTGATCCGAGGGTGTCCGAATGGGGAA--CCGG 359 Query 120 CC-----CTTTGGGTCATTGCATGCTGAATACATA-GGTATGCAAAGCGAACGCGGCGAA 173 || | | | | || |||| |||||| ||| ||| || || ||||| || ||| Sbjct 360 CCGTCGTCATGGCGGCACCGCAT-CTGAATGTATAGGGTGTGTGGAGGGAACGTGG-GAA 417 Query 174 CTGAAACATCT 184 |||||||||| Sbjct 418 GTGAAACATCT 428 >seq81880 Length=236 Score = 96.9 bits (106), Expect = 6e-18 Identities = 88/110 (80%), Gaps = 7/110 (6%) Strand=Plus/Plus Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG-- 68 |||||||||||||| ||||||||||||||||||| | | |||||||||| ||| Sbjct 41 GTGGATGCCTTGGCATGTACAGGCGATGAAGGACGTGGCACGCTGCGATAAGCGTCGGTG 100 Query 69 -GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 || |||||||| |||||| ||| ||||||||||||||||||||| Sbjct 101 AGGTGTGAGCAA----CCTTTGACCCGACGATTTCCGAATGGGGAAACCC 146 >seq68118 Length=450 Score = 75.2 bits (82), Expect = 2e-11 Identities = 64/78 (82%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 |||||||||||||||| ||||||| ||| || |||||||||||||| || ||||| Sbjct 309 GCGAACTGAAACATCTTAGTAGCTAAAGG-AAGGAAATCAACCGAGACCCCGTTAGTAGC 251 Query 229 GGCGAGCGAAATGGGATG 246 ||||||||| | ||||| Sbjct 250 GGCGAGCGAGAGCGGATG 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917203324800