Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq635 785 0.0 seq600 749 0.0 seq3903 453 4e-125 seq2460 363 5e-98 seq34223 361 2e-97 seq90404 352 9e-95 seq610 179 1e-42 seq6973 145 2e-32 seq66771 123 8e-26 seq2262 78.8 3e-12 >seq635 Length=611 Score = 785 bits (870), Expect = 0.0 Identities = 499/537 (93%), Gaps = 7/537 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 7 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAG-CCCCCTTAGGACACCTGCGTTATG 65 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 66 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 125 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| || || |||| |||||||||||| Sbjct 126 GGCCCGCGAAGGACCTTAAAACCAGAAGTTGGACGA--AAATCCAGCCCCGCTTCATTGA 183 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||| | ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 184 ATAAGTAAAAAA-CAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 239 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 240 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 299 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 359 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 419 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 420 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACT 479 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 480 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 536 >seq600 Length=4933 Score = 749 bits (830), Expect = 0.0 Identities = 483/525 (92%), Gaps = 5/525 (1%) Strand=Plus/Plus Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 205 GGAGATTTCTGTTCTCAATGAGTCCCCCTTAGGACACCTGCGTTATTATTTAACAGATGT 264 Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGA 139 |||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||| Sbjct 265 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCAGATCAGCCCAAAAAGGA 324 Query 140 CCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaa 199 |||||| ||| ||| ||| || || |||| || |||||||||| |||||||||| | Sbjct 325 CCTTAATACCAAAAAGTGGGATGTTAATCCCAGCTCTGCTTCATTGAATAAGTAAAAAGA 384 Query 200 CGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACA-CCTCT 258 | |||| ||||||||||||||||| |||| || |||||||||||||||||| ||||| Sbjct 385 CAATAAAGGTAGTGGTATTTCACTGGCGCAAAA---GCTCCCACTTATTCTACACCCTCT 441 Query 259 CAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGA 318 | ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 442 -ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGA 500 Query 319 TTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGA 378 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 501 TTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGA 560 Query 379 ATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAA 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 561 ATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAA 620 Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 621 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 680 Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 681 TCAGAGCACTGGGCAGAAATCACATTGTGTCAACACCACTTTCTG 725 >seq3903 Length=403 Score = 453 bits (502), Expect = 4e-125 Identities = 283/303 (93%), Gaps = 1/303 (0%) Strand=Plus/Minus Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||| ||||||||||| || | ||| |||||||| ||| ||||||||||||||||||| Sbjct 403 CCCACCTATTCTACACCCCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACA 345 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 344 GGGTCTTCTTTCCCCGCTGATTTGGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 285 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 284 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 225 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 224 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTC 165 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACT 538 |||| ||||| ||||||||||||||||||||||||||||||||| | |||| || || Sbjct 164 GAATCTCTTCGCTTTGACATTCAGAGCACTGGGCAGAAATCACAAAGTGTCAGCACTGCT 105 Query 539 TTC 541 ||| Sbjct 104 TTC 102 >seq2460 Length=318 Score = 363 bits (402), Expect = 5e-98 Identities = 265/299 (89%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 294 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGTCCCC-TTAGGACACCTGCGTTATG 236 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 235 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 176 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||| |||||||||||||||| |||| ||| |||||| | |||| |||||||||| || Sbjct 175 GGCCCACGAAGGACCTTAACGCTAGAAGTTGGGCGGTGAGGCCCAGCTCCGCTTCATCGA 116 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTC-ACTTGCGCCGAAACGGCTCCCACTT 245 ||||||||||||||||||||||||| ||||||| || |||| || |||||||| | Sbjct 115 ATAAGTAAAAAAACGATAAGGGTAGTAGTATTTCAACCAGCGCTAAA---GCTCCCACCT 59 Query 246 ATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTC-AACAGGG 301 |||||||| || || ||| |||||||| ||| | |||||||||||||| ||||||| Sbjct 58 ATTCTACACCCCCTACTGTC-TTTCACAATGTCAAACCTAGAGTCAAGCTCAAACAGGG 1 >seq34223 Length=1055 Score = 361 bits (400), Expect = 2e-97 Identities = 402/536 (75%), Gaps = 3/536 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||||||||| ||||| || |||||||||||||| |||| |||| Sbjct 606 CTTTTACTCTACTAGAGATTTCTATTCTCTATAAGTCCCCCTTAGGATACCTATATTATA 547 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||| |||| | | ||| ||| |||||||| |||| | ||| || | |||| ||| Sbjct 546 GTTTAATAGATATACTACCCTAGCTAAACTCCCTACCTAATAATATCTTTAACCTAGATT 487 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||| ||||||||||| | |||| | | || | | | || || ||| ||| | Sbjct 486 AGCCTATAAAGGACCTTAATACTAGAAGTTAGGTAGTAAGGCCTAGCTCTACTTTATTAA 427 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||| ||||||||||| |||||| ||| |||| || ||||| || || Sbjct 426 ATAAGTAAAAAAATAATAAGGGTAGTAGTATTTTACTAGCGCTAAA---GCTCCTACCTA 370 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||| ||| | | || ||| | || | |||||||| ||||| || ||||||||| Sbjct 369 TTCTATACCCCCTATATCTTTTTATAATATTAAACTAGAGTTAAGCTTAATAGGGTCTTC 310 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||| || ||| || ||||| |||||||| ||| | |||| ||||||||||||||| Sbjct 309 TTTCCCTACTAATTTAGCTAAGCCTGTTCCCTTAGCTATAGTTTTGCTAGATAGTAGATA 250 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||| ||| ||||||| |||||| ||| || ||| ||||||||||| | ||| ||| Sbjct 249 GGGATAGTAGGAATCTTATTAATCTATTTATATACGTTACTAATTAGATAATAAGGTATT 190 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 | |||||||||||||||| ||||||||||| | |||||| ||| ||| ||| ||| Sbjct 189 TAGCTACCTTAAGAGAGTTATAGTTACTCCTACTATTTACCTATACTTAGTTAAATCTCT 130 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 | ||||| | ||| |||| ||| || |||||| | ||| | || | ||||||| Sbjct 129 TTACTTTAATATTTAGAGTACTAGGTAGAAATTATATTATATTAATACTACTTTCT 74 >seq90404 Length=689 Score = 352 bits (390), Expect = 9e-95 Identities = 203/208 (98%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 482 CCCCGCTGATTTGGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 541 Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 542 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 601 Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 602 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTCGAATCTCTTCG 661 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAA 517 |||||||||||||||||||||||||||| Sbjct 662 CTTTGACATTCAGAGCACTGGGCAGAAA 689 >seq610 Length=1264 Score = 179 bits (198), Expect = 1e-42 Identities = 106/109 (97%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 436 TAAGAGAGTCA-TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1 TAAGAGAGTCAGTAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTG 60 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 61 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 109 >seq6973 Length=320 Score = 145 bits (160), Expect = 2e-32 Identities = 100/113 (88%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 208 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 267 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAAC 119 |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 268 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAAC 320 >seq66771 Length=652 Score = 123 bits (136), Expect = 8e-26 Identities = 93/106 (88%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 215 TATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAA 273 ||||||||| |||| || |||||||||||||||||||| ||| | ||| |||||||| Sbjct 652 TATTTCACTGGCGCAAAA---GCTCCCACTTATTCTACACC-CTCTATGTCTTTTCACAA 597 Query 274 AGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT 319 ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 596 TGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT 551 >seq2262 Length=376 Score = 78.8 bits (86), Expect = 3e-12 Identities = 62/69 (90%), Gaps = 4/69 (6%) Strand=Plus/Minus Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 |||||| || ||||||||||||||||||||| |||||||| ||||||| |||||| ||| Sbjct 376 GGTTGA-TTACTTCACTTTGACATTCAGAGCGCTGGGCAG-AATCACA-TGCGTC-ACAC 321 Query 535 CACTTTCTG 543 ||||||||| Sbjct 320 CACTTTCTG 312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633069334400