Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002205.1 Length=300 Score E Sequences producing significant alignments: (Bits) Value seq17765 192 1e-46 >seq17765 Length=1797 Score = 192 bits (212), Expect = 1e-46 Identities = 176/221 (80%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 25 TCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGCA 84 ||||||||||| |||||||| |||||||||||||||||| |||||||||||| |||||| Sbjct 1173 TCGATCACGTCGTGCAGCATGGCGGCCATCAGGCTCTGATGGTCCATGTGCATGTCGGCG 1232 Query 85 AGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTTG 144 || || || ||| || || || |||||||||||||| | |||||| || || ||||| || Sbjct 1233 AGGATGTT-GGCGACGGCCAGCGGATGGGTGACATAGGGCTCGCCGCTGCGGCGGCGCTG 1291 Query 145 GCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTGC 204 |||||||| || || ||||||||| | || || || || ||||| ||||||||||| | Sbjct 1292 CCCGTCGTGAGCCTGCTCGGCGTAGTAGTAGGCCCGCCGTACCAGATTGACCTGGTCGGG 1351 Query 205 GCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGC 245 | |||||| ||| | || ||||| || ||| |||| Sbjct 1352 GGTCAGGTAGTCCGCCAGACGCTCGGCCAGCAGGTCGATGC 1392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 856482547200