Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq36348 473 4e-131 seq14834 159 1e-36 >seq36348 Length=390 Score = 473 bits (524), Expect = 4e-131 Identities = 341/391 (87%), Gaps = 2/391 (1%) Strand=Plus/Plus Query 29 CCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAGGGAACCTTTGGGCGCC 88 |||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| Sbjct 1 CCTTGTGCACTTACACTCGACACCTGATTGCCAACCAGGATGAGGGAACCTTTGAGCGCC 60 Query 89 TCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCCA 148 |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 61 TCCGTTACTCTTTAGGAGG-CAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTG 119 Query 149 ACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGTATTTCAA-CAACG 207 | || ||||| || || | ||||||| |||| ||| |||||||||||||||| | | | Sbjct 120 ATCCGGATCACGGACCGAAGTTAGATGTCCAGAACGACCAGAGTGGTATTTCAAACGATG 179 Query 208 ACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGCAC 267 ||||||| |||| ||||| | | ||| ||||||||||||||||||||||| ||| || Sbjct 180 ACTCCACCGACACTGGCGTGCCGACTTCACAGTCTCCCACCTATCCTACACAAGCCGTAC 239 Query 268 CGAATGCCAATACCAAGCTATAGTGAAGGTCCCGGGGTCTTTTCGTCCTGCCGCGCGAAA 327 |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| || Sbjct 240 CGAACACCAATACCAAGCTATAGTGAAGGTCCCGGGGTCTTTCCGTCCTGCTGCGCGTAA 299 Query 328 CGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTC 387 |||||||||||||||||| ||||||||| ||| | | |||||||||||| | | |||| Sbjct 300 CGAGCATCTTTACTCGTAGTGCAATTTCGCCGAGTTCGCGGTTGAGACAGCGGAGAAGTC 359 Query 388 GTTACGCCATTCGTGCAGGTCGGAACTTACC 418 ||||||||||||||||||||||||||||||| Sbjct 360 GTTACGCCATTCGTGCAGGTCGGAACTTACC 390 >seq14834 Length=342 Score = 159 bits (176), Expect = 1e-36 Identities = 119/135 (88%), Gaps = 6/135 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || ||||| |||||||||||||||||||||| |||||| ||||||||||||| Sbjct 129 TCGACACGTCCGTCTCACAGTCAAGCTCCCTTGTGCACT-ACACTCGCCACCTGATTGCC 71 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||||||||||||||||||| ||||||||||| ||||| | | ||||||| ||||| Sbjct 70 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCGTT-CATTTAG---GAGCAACCG-CCCAG 16 Query 121 TTAAACTACCCACCA 135 |||||||||||| || Sbjct 15 TTAAACTACCCATCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1700181772800