Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq4371 205 2e-50 seq39191 183 6e-44 seq6010 156 9e-36 seq44237 138 2e-30 seq6009 123 5e-26 >seq4371 Length=734 Score = 205 bits (226), Expect = 2e-50 Identities = 231/304 (76%), Gaps = 13/304 (4%) Strand=Plus/Plus Query 69 TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCAT-CCTTCACGCTACTTGG 127 || |||||| || ||| ||||| || | | ||||||||| ||| ||||| | ||| Sbjct 280 TTCTTCCCTGGCAACAGAGCTTTACGATTCCGAAAACCTTCATTCCTGCACGCGGCATGG 339 Query 128 CTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTG 187 ||||||||| || || |||||||||||||||||| ||| ||||||||||||||||| || Sbjct 340 CTGGTTCAGGCTTCCGCCCATTGACCAATATTCCTTACT-CTGCCTCCCGTAGGAGTCTG 398 Query 188 GACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGC 247 | |||||||||||| ||| |||||||| | |||||||||| |||||| |||||| | | Sbjct 399 GTCCGTGTCTCAGTACCAGTGTGGGGG-TCATCCTCTCAGATCCCCTAAACATCGTCGCC 457 Query 248 TAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGA 307 | ||| ||||||||| || |||| |||||| ||||| |||||| | || || | Sbjct 458 TTGGTAAGCCGTTACCTTACCAACTAGCTAATGTTCCGCATGCCCATCTTTACCCTATAA 517 Query 308 ATCTTT-----AATGATGATACCATGCAATCTCATCATACCATCAGGTATTAATCTTTCT 362 || ||| ||| ||||| |||| ||||| || | || ||| ||||||| ||| Sbjct 518 ATATTTGATCAAATTATGATGCCAT--AATCTAATTTT---ATGCGGTGTTAATCTCTCT 572 Query 363 TTCG 366 |||| Sbjct 573 TTCG 576 >seq39191 Length=1123 Score = 183 bits (202), Expect = 6e-44 Identities = 186/241 (77%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 73 TCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGT 132 ||||| ||||||| ||||||| || || |||||||| |||||| | | ||||| Sbjct 26 TCCCTGGTAAAAGAGCTTTACAACCCTAAGG-CCTTCATCACTCACGCGGCATTGCTGGA 84 Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192 |||| || || |||||| |||||||||| |||||||||||||||||||||| ||| ||| Sbjct 85 TCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 144 Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGT 252 ||||||||| ||| ||||| || | |||||||||| | ||| ||||| |||| ||| Sbjct 145 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAGGATCGTCGGCTTGGT 204 Query 253 GGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTT 312 |||| ||||||| || |||||||||| |||| | |||| | |||| |||||| Sbjct 205 AGGCCATTACCCCACCAACTACCTAATCCTACGCGGGCTCATCCCTCGGCGATAAATCTT 264 Query 313 T 313 | Sbjct 265 T 265 >seq6010 Length=1125 Score = 156 bits (172), Expect = 9e-36 Identities = 150/191 (79%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||| | ||| || ||||| || ||||| | ||||||| |||| || ||| |||| Sbjct 1062 TTTACGACCCG-AGGTCCTTCTTCACACACGCGGCATGGCTGGATCAGGCTTTCGCCCAT 1004 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| |||||||||||||||||||| || Sbjct 1003 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 944 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 || || | |||||||||| | || ||||| | || ||| |||| |||||| || Sbjct 943 TGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTAGGCCTTTACCCTACC 884 Query 269 TACTACCTAAT 279 |||| ||||| Sbjct 883 AACTAGCTAAT 873 >seq44237 Length=356 Score = 138 bits (152), Expect = 2e-30 Identities = 156/208 (75%), Gaps = 16/208 (8%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| |||| |||| ||||| ||| |||||| || || || | Sbjct 192 GGCTGCTGGCACGTAGTTGGCCGGTGCTTCTTCTGCAGGTACCGTCA--CTTCCGC---- 139 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || ||||| | ||||| |||||||| ||| || || |||||| |||||| Sbjct 138 --------TTCGTCCCTGCTGAAAGAGGTTTACAACCCGAAGG-CCGTCATCCCTCACGC 88 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | |||| |||| || ||| |||||| ||||||||| |||||||||||||||||| Sbjct 87 GGCGTCGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCC-CACTGCTGCCTCCCGTAG 29 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATG 208 |||| |||||||||||||||||||| || Sbjct 28 GAGTCTGGACCGTGTCTCAGTTCCAGTG 1 >seq6009 Length=607 Score = 123 bits (136), Expect = 5e-26 Identities = 162/218 (74%), Gaps = 10/218 (5%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTA-CATACAAGCTCCCACA-- 57 ||||||||||||| ||||||||| ||||||||| |||| | | || ||| || Sbjct 227 GGCTGCTGGCACGAAGTTAGCCGGTGCTTATTCTGTTGGTAACGTCAAAACTCACAGGTA 168 Query 58 --CG-TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 || | || || |||| | |||| ||||| | ||| | ||||| || Sbjct 167 TTCGCTATGAGCCCTTCCTCCCAACTTAAAGTGCTTTACGACCCGAGG--CCTTCTTCAC 110 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | ||||||| |||| || ||| |||||| |||||||||| |||||||||||| Sbjct 109 ACACGCGGCATGGCTGGATCAGGCT-TCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 51 Query 175 CCGTAGGAGTTTGGA-CCGTGTCTCAGTTCCAATGTGG 211 |||||||||| |||| |||||||||||||||| ||||| Sbjct 50 CCGTAGGAGTCTGGATCCGTGTCTCAGTTCCAGTGTGG 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1067407353600