Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq97857 241 1e-58 seq8712 185 7e-42 seq51865 138 9e-28 seq95708 131 1e-25 seq108015 123 2e-23 seq44974 120 2e-22 >seq97857 Length=911 Score = 241 bits (266), Expect = 1e-58 Identities = 407/585 (70%), Gaps = 11/585 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || || ||||| || | ||| |||||||| | ||| || || ||||| ||||| ||| Sbjct 304 GGCAGTGCTAGAGAGGCCAAGTTACAGACAGCAACCTCATCTGGGGCGGTGTACTCAACA 363 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| | || | ||| || ||||| | ||||| || || || ||||| Sbjct 364 ATCTCAGTGCATAAGTTCGAACTGCGGATAGTGCCGAGATTCTTCTGGTTGCT-TTGCGG 422 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| || |||||||| | |||| | ||| | || |||||| ||| | ||| | |||| Sbjct 423 TTGCAAGCGTCCTTGTAAAGCATGAAGGGATTACCAGTCTCAGTTTGAGCCTCGAGGATG 482 Query 66182 GCGTGCCAAA----GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTA 66237 || | | | | ||||| | || | ||| ||| | | ||| | || || Sbjct 483 GCATACGAGCTTCTGGGCGCGAACGGTCTC---ACG-ACCTTTGTTCTTTTTC--TCATA 536 Query 66238 ATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTG 66297 | |||||||||| || || ||||| | || || | |||| ||||||| || Sbjct 537 ACTTTCGTAGAGGGCCTCAAACTCATCACCGTAGACGTCCGCGAGACCAGGACACTCGTT 596 Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357 ||||||||||| | ||| || |||| || || ||||| ||| || ||||| || || Sbjct 597 GGGACACATCAGAGTCCACTCCCCATTCTCTTGGACACGCTTCATGAAGAGATCCGGGAT 656 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417 ||| ||||||||||| | ||||| || || ||||| |||| || || || || | Sbjct 657 CCACAGGGCGTAGAATAAGTCGCGAGCGCGAACTTCCTCTTTGCCATGGTTCTTACGAAG 716 Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 ||| | ||| |||| || ||||| |||||||| || |||||||| ||||| | || Sbjct 717 GTCCAAGAAGCCAAATATATCGGCGTGCCATGGCTCGAGGTAGATTGCGAATGCTCCGGG 776 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 ||| ||| ||||| || |||||||| || || |||||| |||| || ||||| || Sbjct 777 ACGCTTGTTACCACCCTGATCGACGTAACGGGCCGTGTTGTTGTAGACGCGTAACATGGG 836 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCC 66582 | ||||||||| || | || || ||||| ||||| ||| || Sbjct 837 GATGAGCCCGTTGGACGTTCCGTTAGTGCCTCCGATGTAGGAGCC 881 >seq8712 Length=1748 Score = 185 bits (204), Expect = 7e-42 Identities = 432/645 (67%), Gaps = 10/645 (2%) Strand=Plus/Plus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 || ||||| || | ||| || || | || ||| ||||| ||| || | ||| || ||| Sbjct 134 GGGCACATGAGAGTCCAGTCGCCGTTCTTTTCAACACGCTTCATGAACAAATCGGGAATC 193 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || || || |||||| || || || || ||||| ||||||| || || |||| | Sbjct 194 CATAGAGCAAGGAAGAGGTCACGGGCACGAACTTCCTCCTTGCCGTGGTTCTTTCGCAGG 253 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 |||||||||||||| | ||| || ||||| || |||||||| |||| || | || Sbjct 254 TCGAGGAACTCAAACACGTCTGCGTGCCACGGCTCCAGGTAAATGGGCAAAGCACCAGGT 313 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 || ||| |||||| ||||||||||| | ||| |||||||| || || | ||| || Sbjct 314 CGCTTGTTGCCACCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACGCGAAGCATGGGA 373 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 |||| ||||| || |||| ||||||||| | ||| || || || || || | Sbjct 374 ACGACGCCGTTTGAGGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTGGCACGAATGCGG 433 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAG---ATGGCAGCACAATCGGCCACT 66655 || || ||||| || || || || ||| |||| ||| ||||| |||| || | | Sbjct 434 TGGACGTTCAGGCCGATGCCGCCAGCCATCTTGGAGATCATGGC-GCAC-GTCTGAGGGT 491 Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTC-AGGAGGTAGCATGAACTAAG 66714 ||| | ||||| || ||| |||| |||| | ||| | ||| |||| || || Sbjct 492 GTC--ATAGATGCCTTCGATGCTGTCATCCTTCA--GTCGACAAGGAAGCAGGATGACAG 547 Query 66715 TTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCG 66774 ||| || || || | || ||| || ||||| | ||||| || ||| | | || Sbjct 548 CTGGCATTGTGGCGTACCAGCGTTGAATAGTGTGGGCGAGGCGTGGGTGAAGAATTTGCT 607 Query 66775 AGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC 66834 |||||| ||||| || || | |||| || | ||| || || || |||| || Sbjct 608 CGACATGAGGTTGTAGGTTTCCAGGACACGCTCCAGGTTGTCTCCCCAGATACCGACGGC 667 Query 66835 ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTA 66894 | ||||| | | || || || || ||||| | | | |||| | | | || Sbjct 668 AACACGCATAATCATGTGCTGTGGTCGCTCGACAATCTTGCCGTTGAGCTTGAGGAGATA 727 Query 66895 GGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||| || ||||| ||||||| ||||||||| ||| ||||| || Sbjct 728 GGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 772 >seq51865 Length=821 Score = 138 bits (152), Expect = 9e-28 Identities = 130/166 (78%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || ||||||||||| |||||||| |||||||| ||||| || | || || ||| | Sbjct 90 GCCTTCTTTGCCGCCTCGGACGGCATCGTCAACGAGAACTTGGTCGAGCGCTTCTCTAGC 149 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 ||||| ||| | | |||||||| || ||||||||||||||||| |||||||| ||| Sbjct 150 GAGGTACAAATCCCAGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACGTC 209 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 |||||||||| |||| | |||||||| || |||||||| |||| Sbjct 210 CACTCGGAGACGTACTCGTTGCTCATCGACACCTACATCAGCGAGC 255 >seq95708 Length=954 Score = 131 bits (144), Expect = 1e-25 Identities = 236/335 (70%), Gaps = 10/335 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || ||||||||||||||| | || || | ||| | Sbjct 347 ATTTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACGCCGAAG-AGATTGATCTC 289 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 |||||||| || | || ||| | ||| | | ||| || || || | ||||| Sbjct 288 TCCAAAGATCTGCACGATTGGAACAACCGTCTGAACGA-CGACGAGAAATACTTCATCTC 230 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| || || || ||||| || ||||| ||||| || | || || Sbjct 229 CCACATCCTCGCATTCTTCGCTGCCTCTGACGGCATTGTCAACGAGAACTTGGTTGAGCG 170 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 |||| ||| || |||| |||||| | || || ||||| || ||||| |||||||| | Sbjct 169 TTTCAGCGGAG-AGGTCCAAGTGCCAGAAGCTCGTTGCTTTTACGGATTCCAGATCATGA 111 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 |||| || |||||||||||| ||| | | || ||||| || |||| |||| | Sbjct 110 TGGAAAACATCCACTCGGAGACTTACTCCCTCTTGATTGATACCTATATCAAAGAGCACG 51 Query 61382 CGGAACGTGAACGA-TTGTTCAATGCCATCGAGAC 61415 | |||| ||| | | |||||||| || ||||| Sbjct 50 CTCAACG-CAACTACCTTTTCAATGCAATTGAGAC 17 >seq108015 Length=311 Score = 123 bits (136), Expect = 2e-23 Identities = 135/177 (76%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC-GCGCA 61271 || ||||||||||| || || ||||||||||| ||||| | | ||||||||| |||| Sbjct 240 GCCTTCTTTGCCGCCTCCGATGGTATCGTCAACGAGAACCTGGTTGAACGTTTCAGCGC- 182 Query 61272 GGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGT 61331 |||||| ||| | | ||||| || || || || ||||||||||| ||||||||| | Sbjct 181 GGAGGTTCAAATTCCTGAGGCTCGCTGCTTTTATGGCTTCCAGATCATGATGGAGAATAT 122 Query 61332 CCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACG 61388 || || || | ||| | ||||||| ||||| || |||| ||||| |||| |||| Sbjct 121 TCATTCTGAAACATACTCTCTTCTCATTGATACCTATATCAAGGAGCAGGCGCAACG 65 >seq44974 Length=881 Score = 120 bits (132), Expect = 2e-22 Identities = 305/458 (67%), Gaps = 12/458 (3%) Strand=Plus/Minus Query 61480 TTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTT 61539 |||| | | || ||| | || || || | ||||| ||| | || |||||||| | ||| Sbjct 727 TTTGCTCAGCGCTTGGTAGCTTTCGCCGCCGTCGAAGGTATCTTCTTCAGTGGTGCCTTT 668 Query 61540 GCCG-CAATCTTTTGGTTGAAGAAACGTGGACTTATG-CCCGGTCTGACCTTCAGCAATG 61597 ||| | ||||| ||| | ||||| ||||| || ||| ||||| || |||||| ||| | Sbjct 667 GCCTACTATCTTCTGGCTCAAGAAGCGTGGTCTGATGTCCCGGACTCACCTTCTCCAACG 608 Query 61598 AGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT 61657 || | || || ||||| |||| |||| ||||||||| |||| | || Sbjct 607 AGCTAATCTCCCGCGATGAGGTT-TGCACACTGATTTTGCATGCCTGCTG------CACT 555 Query 61658 ATCTGGTGAATCGTC-CGTCGG--AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAA 61714 || |||| | || || | | || | | || ||| | || || || | Sbjct 554 CTCACATGAAGCATCGCGCCAGCAAGCAAATCATTCAGGAAATTATCACAGATGCTGTCA 495 Query 61715 CTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTG 61774 | ||||| || || || |||| || || ||||| | | ||| |||| ||||| Sbjct 494 CCATCGAGCAAGAGTTCTTGACAGAGGCATTGCCATGCGCTCTCCTCGGTATGAACGCCA 435 Query 61775 GACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGA 61834 | ||| |||||| |||||||| || ||||| || || |||| | |||||| Sbjct 434 CGTTGATGAAGCAGTACATTGAATTCGTCGCCGATCGCCTCCTGGTTGCACTGGGTAACG 375 Query 61835 AGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCA 61894 || | | || || || ||||| |||||||||||||| | ||||| || | |||| Sbjct 374 AGAAGGTGTACAAGACTGCCAACCCCTTTGATTTCATGGAGAACATTTCCCTAGGCGGCA 315 Query 61895 AGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 ||||||| || || ||||| || || ||||| |||||| Sbjct 314 AGACGAACTTCTTTGAGAAGCGAGTCGGCGAGTATCAA 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396936649592000