Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031073.1 Length=94555 Score E Sequences producing significant alignments: (Bits) Value seq57034 100 2e-16 seq56781 84.2 1e-11 seq66202 82.4 5e-11 >seq57034 Length=296 Score = 100 bits (110), Expect = 2e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 21726 GATCTCCGGTTGTGCGTCTTTATGGCAACGCAGGTAGAAGAAGTTATCTAGTTCCGTGGC 21785 |||||| |||||||| ||| ||| | || || ||||||| ||||| || || || || Sbjct 145 GATCTCAGGTTGTGCATCTGTATCCAAGCGTAGCCAGAAGAAATTATCAAGCTCGGTTGC 204 Query 21786 TGTAACAACGGTCTTCATCATCTGGAATGGCTCAAGGAGACGGTTAACCACCTGCTTGTG 21845 || | ||||||||||||||||||||||| |||| ||||| || || | ||||||||| Sbjct 205 AGTCATGACGGTCTTCATCATCTGGAATGGTTCAACAAGACGATTCACAATCTGCTTGTG 264 >seq56781 Length=1399 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 21727 ATCTCCGGTTGTGCGTCTTTATGGCAACGCAGGTAGAAGAAGTTATCTAGTTCCGTGGCT 21786 || || |||||||| |||| || |||| | ||||||||||||| ||||| || ||| Sbjct 183 ATTTCAGGTTGTGCATCTTCATCTAAACGTAACCAGAAGAAGTTATCCAGTTCTGTTGCT 124 Query 21787 GTAACAACGGTCTTCATCATCTGGAATGGCTCAAGGAGACGGTTAACCACCTGCTTGTG 21845 || | || ||||||||||||||||| || || | | |||||| || | ||| || || Sbjct 123 GTCATGACAGTCTTCATCATCTGGAACGGTTCGACCAAACGGTTCACAATCTGTTTATG 65 >seq66202 Length=972 Score = 82.4 bits (90), Expect = 5e-11 Identities = 166/245 (68%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 86089 AAGGGAGCTATCCAAGTTCTGTGGGAAACCTTCGGCGGTACTGTGAATGAAGCAGGTTAT 86148 |||||| || | || ||||||||||||| ||| || ||| || || |||||| Sbjct 629 AAGGGATCTGTTCAGGTTCTGTGGGAAATCTTTGGTGGTGAAGTTAACTCTAAAGGTTAC 688 Query 86149 AAGATGCTCGATTCTCATATCGGTTTGATCTATGGGGATTCCATTAC---GACTCGCCGA 86205 ||| | || ||| | || | ||| | |||||||| ||||| || || || ||| Sbjct 689 AAGGTTCTTGATACACACGTTGGTGTAATCTATGGTGATTCAATCACTCTGAAACGC--- 745 Query 86206 GCAGCTAAAATCTTGGAGCGCTTGAAGGAGAAAGGTTTCGCTTCCCTGAACGTAGTGTTT 86265 || || ||||||| || |||||| | | |||||||| || || || | || || Sbjct 746 GCCACTGAAATCTTTGAACGCTTGGAAGCTAAAGGTTTTGCATCAAGTAATATTGTATTC 805 Query 86266 GGAGTTGGCAGTTACACTTACCAGTGCAACACCCGGGATACTTTCGGATTCGCAGTGAAA 86325 || |||| || || |||||| | | ||| || || || || || || || ||| ||| Sbjct 806 GGTATTGGTAGCTATACTTACAACTACAATACACGTGACACCTTTGGTTTTGCATGTAAA 865 Query 86326 GCTAC 86330 || || Sbjct 866 GCAAC 870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 301970898042800