Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031108.1 Length=39640 Score E Sequences producing significant alignments: (Bits) Value seq79505 176 1e-39 seq80798 170 5e-38 >seq79505 Length=692 Score = 176 bits (194), Expect = 1e-39 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 9698 CCTTCAGCCAGGACCGCGTTGTTGGCGGTGTCCCACGCGACCCCGAGTCCCTCGGCGACA 9757 ||||| |||||||| |||| ||| ||| || ||| | ||| |||| | || ||||| Sbjct 13 CCTTCGGCCAGGACGGCGTCGTTCGCGCAGTTCCAGGAGACGGCGAGGGCTTCAGCGACG 72 Query 9758 CGGGCGACGGTGAGGTGTGCGACCACGATCCCTTCCAGCGCCCACCGCAGCCCGGTGCGC 9817 ||||||| ||| ||||| |||||||||| | |||| ||||| ||||| || ||| Sbjct 73 CGGGCGATGGTCAGGTGCTGGACCACGATCGCCACCAGGGCCCAGCGCAGTCCACCGCGT 132 Query 9818 GAGAGCTTCGCGCGTGGCTCCGCCGCGGCGCTGGTGTCTTGGCGCCACACGTGTCCGCAG 9877 || ||||| ||||| ||||| || || |||||| || || ||||| ||||| |||||| Sbjct 133 GACAGCTTGGCGCGGGGCTCAGCGGCCAGGCTGGTCTCCTGACGCCAGACGTGGCCGCAG 192 Query 9878 TCGGCACAGCGGTAGCGGCGCACTACAACTTCCAGCACGGTCGGTCGCCAGCCCAGCGGC 9937 ||| ||||||||||||||| || || | || ||| |||||||| || | ||| Sbjct 193 CCGGTACAGCGGTAGCGGCGGACCCGTACGTGCAAGGTGGTGGGTCGCCACCCGAACGGG 252 Query 9938 TCGTGGGCCAACCGCCGGATCACGGTG 9964 ||||||||| ||| || | |||||| Sbjct 253 GCGTGGGCCAGCCGACGCACGACGGTG 279 >seq80798 Length=804 Score = 170 bits (188), Expect = 5e-38 Identities = 172/219 (79%), Gaps = 10/219 (5%) Strand=Plus/Plus Query 8821 GGCTCATCCCAATCGGGGGTGTAGGAGTTGGGGTCTGAAGCCGCCGGTCTCGAGCAGGCT 8880 ||||| || | |||| |||||||| | ||||||||| ||||||| ||| |||||||| Sbjct 566 GGCTC-TCACGATCGAGGGTGTAG----TCGGGTCTGAACCCGCCGGCCTCCAGCAGGCT 620 Query 8881 TCGGGCGATGTAGTTGGTCAGGTTGCGGAACCCGAGTG-CGGAGCCGCGCAGGTGTTCGA 8939 |||||||||||||| || ||||||||||| ||||| | ||||||| || || ||||||| Sbjct 621 GCGGGCGATGTAGTTAGTGAGGTTGCGGAAGCCGAGGGACGGAGCCTCGTAGTTGTTCGA 680 Query 8940 GCCGTCCGTTGAGCGCCTCGGTCGGCCCGTTGCTGG--TGCCGGGTCGTTCGAAGTAGGC 8997 | | || ||| | ||||||||| ||||| |||| | ||||| || ||||||||||| Sbjct 681 GGCTGCC--TGATGGTCTCGGTCGGGCCGTTACTGGTATTCCGGGACGGTCGAAGTAGGC 738 Query 8998 GAGCACGTCAGCGGCTCGCTTCTTCAGGGTCCGGCCCAG 9036 | ||||| || | ||||| |||| ||||| ||||| Sbjct 739 CACGACGTCCGCATCGCGCTTGGTCAGCGTCCGACCCAG 777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126530314657200