Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq29027 140 9e-29 >seq29027 Length=2418 Score = 140 bits (154), Expect = 9e-29 Identities = 191/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 33660 CCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTC 33719 |||||| | ||||||| ||| ||||||| ||| || || || ||||| | || || || Sbjct 905 CCATTTACGGGTGCGCAGCTGGCCTTCAATATACACCTGAGAACCTTTACGCAGGTATTC 964 Query 33720 ACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTT 33779 || || | ||| || || |||||||| | || || ||||||||||| || ||| || Sbjct 965 CCCCGCCACTTCCGCCAGTTTGCCAAACAGCACGACACGGTGCCATTCGGTGATCTCTTT 1024 Query 33780 TTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAAC 33839 || ||||| || ||| || ||| || || ||||| | | | |||||| || Sbjct 1025 GTTTTCACCGGTCTGCTTGTCGCGCCAGCTCTCAGAGGTAGCCAGCGTAATGTTGGCGAC 1084 Query 33840 AGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGAT 33899 |||||| |||||||||||||| || ||||| || ||||| || | | |||| | || Sbjct 1085 AGCGCCACCATTTGGCATGTAACGTACTTCCGGATCCTGACCCAGATTCCCGACAAGAAT 1144 Query 33900 TACTTTATTTACGCCGCGAGTTGCCAT 33926 ||||| || ||||| ||| | ||||| Sbjct 1145 CACTTTGTTAACGCCACGACTGGCCAT 1171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144748481774400