Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq49 87.8 5e-15 >seq49 Length=33859 Score = 87.8 bits (96), Expect = 5e-15 Identities = 131/184 (71%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | | |||||| Sbjct 20634 CAAGTCATCATGACCTTAATATTGTGGGCTATAGACGTGCCACATATTCCTAGACAAAGA 20575 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | || ||| | || | |||| ||||| ||||| | | | ||||||||||| Sbjct 20574 GATGCAAAAATGTGAATTTAAGCTAATCC-ATAAAATAGGATAAAAAATGGATTGTAGTC 20516 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC--ATGCTACGGT 483 || |||||||||||||||| | ||| |||||||||||| |||| | ||| ||||| Sbjct 20515 TGAAACTCGACTATATGAAAAAGTAATTGCTAGTAATCGTGAATCACCATATGTCACGGT 20456 Query 484 GAAT 487 |||| Sbjct 20455 GAAT 20452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503998691520