Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq75 77.0 8e-12 seq66 77.0 8e-12 seq51 77.0 8e-12 seq48 77.0 8e-12 seq3 77.0 8e-12 >seq75 Length=11971 Score = 77.0 bits (84), Expect = 8e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 ||||||||||| || || || || |||||||||||||||||||| ||||||| || | Sbjct 2618 TGACACTGAGGGATGAGAGAGTAGGTCGCAAACAGGATTAGATACCCCGGTAGTCAACTC 2677 Query 326 CGTAAACGATGA 337 ||| |||||||| Sbjct 2678 CGTCAACGATGA 2689 >seq66 Length=14737 Score = 77.0 bits (84), Expect = 8e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 ||||||||||| || || || || |||||||||||||||||||| ||||||| || | Sbjct 12722 TGACACTGAGGGATGAGAGAGTAGGTCGCAAACAGGATTAGATACCCCGGTAGTCAACTC 12781 Query 326 CGTAAACGATGA 337 ||| |||||||| Sbjct 12782 CGTCAACGATGA 12793 >seq51 Length=27814 Score = 77.0 bits (84), Expect = 8e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 ||||||||||| || || || || |||||||||||||||||||| ||||||| || | Sbjct 18462 TGACACTGAGGGATGAGAGAGTAGGTCGCAAACAGGATTAGATACCCCGGTAGTCAACTC 18521 Query 326 CGTAAACGATGA 337 ||| |||||||| Sbjct 18522 CGTCAACGATGA 18533 >seq48 Length=39949 Score = 77.0 bits (84), Expect = 8e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 ||||||||||| || || || || |||||||||||||||||||| ||||||| || | Sbjct 32230 TGACACTGAGGGATGAGAGAGTAGGTCGCAAACAGGATTAGATACCCCGGTAGTCAACTC 32171 Query 326 CGTAAACGATGA 337 ||| |||||||| Sbjct 32170 CGTCAACGATGA 32159 >seq3 Length=4596 Score = 77.0 bits (84), Expect = 8e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 ||||||||||| || || || || |||||||||||||||||||| ||||||| || | Sbjct 2605 TGACACTGAGGGATGAGAGAGTAGGTCGCAAACAGGATTAGATACCCCGGTAGTCAACTC 2664 Query 326 CGTAAACGATGA 337 ||| |||||||| Sbjct 2665 CGTCAACGATGA 2676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203198953216