Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq22 86.0 5e-12 >seq22 Length=1232782 Score = 86.0 bits (94), Expect = 5e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || || ||| ||| ||||||||||||||||| || || || || | || || ||||| Sbjct 877575 TCAACTCGAGACATGAATAGATCAGGTATCCAAAGCGCATAAAACAAGTCCCGAGCTCGA 877634 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 || || |||||||||| || | || ||| | | ||||| | || ||||||||| Sbjct 877635 CTTTCTTCCTTGCCGTGATTCTTCCTCAGGTCTAACCAGTCAAAAACATCCGCATGCCAT 877694 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 || || |||||||| || || | || | |||| || ||||| ||||| || || Sbjct 877695 GGCTCAAGGTAGATTGCAAAGGCACCAGGTCTTTTGTTACCTCCTTGATCGACATATCGC 877754 Query 66509 GC 66510 || Sbjct 877755 GC 877756 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCC 65872 ||||| || |||||||| || ||||| || ||||| || | || || || | ||||| Sbjct 876947 TCGGCTAGTCCTTGAACCCCGATACCAATCGGACGGTGTCTCATGTTCGACTTTTTCGCC 877006 Query 65873 TCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATT 65916 ||||| || |||||||||||||| ||||| || | ||||| ||| Sbjct 877007 TCAGGCACCGGGTAGTAATTGATGTCGATGATCCTATTCAGATT 877050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567578453680