Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq46155 214 3e-53 seq8218 205 1e-50 seq55872 167 4e-39 >seq46155 Length=1264 Score = 214 bits (236), Expect = 3e-53 Identities = 198/251 (79%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 8 TGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTT 67 ||||| |||||||||| ||| |||| ||||||||||| ||||| || ||||||||||| Sbjct 666 TGGCTTGGTCAGTGTAGTGCGTGTGCAGCCCAGAACATTTAAGGAAATTACAGACCTGTT 725 Query 68 ATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC 127 ||| || | ||| |||| || | ||| ||||||||||||| || || | Sbjct 726 ATTTCCACTGACTGCCATCAACTAAACTTTGATACTCCCTCTAAGAAGTAAGAAGTCAGC 785 Query 128 CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | ||| | | || |||||||||||| |||| || |||| |||| | |||||||| ||| Sbjct 786 CTTAGCCAACTGGACTATTTAGCAGGGAAAGGCCTTGTTCATTATTGAAATTAACCTGAC 845 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 |||| |||||||||||||||||| ||||||||||| || ||| | |||||||||| |||| Sbjct 846 AAATAACTCCACCAACTAAGAACTGCCATGCACCAACAACCACAAAATCAAGAAAAAGCT 905 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 906 ATCAATCTGTC 916 >seq8218 Length=4004 Score = 205 bits (226), Expect = 1e-50 Identities = 200/258 (78%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3908 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 3849 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||| ||| || | | ||||||| |||| ||| ||| Sbjct 3848 ACCTGTTATTGCCTCCAACTTGCATAAACTAAATGTTGATAGTCCTTCTAGGAATTCAGA 3789 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| || || | | | ||| || ||| ||||| | | ||||| ||| || Sbjct 3788 AGCCAGCCTTATCCAGCTGAACCATTCAGTAGGAGAAGGTATTCCTATTTATCAGAACTA 3729 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 || ||| |||||| ||||||||||| ||| |||||||||||||| |||| || || | Sbjct 3728 ACAAGAAAAATCATACCACCAACTAATAACAGCCATGCACCACCAAACATAAGATAAATA 3669 Query 241 AAGAGCTATCAATCTGTC 258 | ||||||||||||||| Sbjct 3668 GAAAGCTATCAATCTGTC 3651 >seq55872 Length=1016 Score = 167 bits (184), Expect = 4e-39 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 800 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 859 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||| ||| || | | ||||||| |||| ||| ||| Sbjct 860 ACCTGTTATTGCCTCCAACTTGCATAAACTAAATGTTGATAGTCCTTCTAGGAATTCAGA 919 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| || || | | | ||| || ||| ||||| | | ||||| ||| || Sbjct 920 AGCCAGCCTTATCCAGCTGAACCATTCAGTAGGAGAAGGTATTCCTATTTATCAGAACTA 979 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 || ||| |||||| ||||||||||| ||| |||||| Sbjct 980 ACAAGAAAAATCATACCACCAACTAATAACAGCCATG 1016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796357631829