Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq15031 251 8e-62 seq37735 138 1e-27 >seq15031 Length=1318 Score = 251 bits (278), Expect = 8e-62 Identities = 295/396 (74%), Gaps = 2/396 (1%) Strand=Plus/Plus Query 160713 CGTGAACCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTCTGGTGCAGTTGTT 160772 ||||| || ||| |||| || || | ||||||||||| || || |||||||| || || Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 160773 CCTTCTTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCTGCATCTCTTGAT 160832 ||| |||| || || ||| | || || || || || |||||||| ||||| ||||| Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGAT 1042 Query 160833 GAATGGCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTTCCTGATCGGCATC 160892 |||||| | |||||||| |||||||| |||| | || | |||||| | | || | Sbjct 1043 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 1102 Query 160893 TTCTGCTACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCATGCGCCCCTGGATC 160952 ||||| |||||||| |||||||||||| | || || || ||||| || ||||| Sbjct 1103 GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGAT- 1161 Query 160953 TGC-GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTT 161011 ||| ||||||||||| || |||||||| || |||| ||| || ||| | |||||||| | Sbjct 1162 TGCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTAT 1221 Query 161012 CGGTCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCAT 161071 ||||| || || || ||||||||||| || || || |||||||| ||||| || || Sbjct 1222 TGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTAT 1281 Query 161072 GCTTGTCTTCCAGGCAGAACACAACATCCTGATGCA 161107 | |||| || ||||| || || || || || ||||| Sbjct 1282 GATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 >seq37735 Length=758 Score = 138 bits (152), Expect = 1e-27 Identities = 251/362 (69%), Gaps = 4/362 (1%) Strand=Plus/Minus Query 163980 GGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGCGTCT 164039 || || ||| | || |||||||| ||||| || ||||| || || || | || | Sbjct 360 GGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCAAGT 301 Query 164040 AGTTACCTTGAGGG-TGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGAT-GCTA 164097 ||| | || || ||| || ||| | || || || || || || |||||| || ||| Sbjct 300 TCTTATTTGGAAGGATGC-AACTTCTTAACCGCAGCAGTCTCCACTCCTGCTAATAGCT- 243 Query 164098 TGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAGGTGGT 164157 | | || ||| | | |||| ||||||||||| | ||||| || || | | |||| Sbjct 242 TAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTGGT 183 Query 164158 GCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGATCGGTT 164217 | ||| | || || || ||| ||||||| || ||||||| |||||| | || |||| Sbjct 182 GTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGTT 123 Query 164218 TCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGCTATTG 164277 ||||| | || || |||||| |||| || ||| | || || || ||||| |||| Sbjct 122 TCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGGCCTTATAATGCAATTG 63 Query 164278 CGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGGGCAAT 164337 | ||||| ||||| |||||||| ||||| || |||||||| || || || || || | Sbjct 62 CATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGTCAGT 3 Query 164338 CT 164339 || Sbjct 2 CT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558927318395600