Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07]
15,715 sequences; 99,534,058 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq6726 259 7e-67
seq11496 104 4e-20
>seq6726
Length=48881
Score = 259 bits (286), Expect = 7e-67
Identities = 197/229 (86%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| ||| |||||| ||||||||||| ||| |
Sbjct 27153 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATACGCTTACTAGGTATT-C 27096
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||||||||| || ||||| ||||||
Sbjct 27095 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCACAAGATT 27036
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | | || | ||||||||| ||||| || | |||||||||||||||||||
Sbjct 27035 ACCCAATCTTTTCAGATAAGGTGATATACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCG 26976
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 26975 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 26927
>seq11496
Length=34879
Score = 104 bits (114), Expect = 4e-20
Identities = 83/97 (86%), Gaps = 5/97 (5%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| || ||||||| ||||||||||| | |||
Sbjct 9196 GTACAAAGGGCAGGGACGTAATCAACGCATGC-TGATGACATACGCTTACTAGGTA-TTC 9139
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCA 97
|||||||||| || |||||||||| ||||||||||
Sbjct 9138 CTCGTTGAAG---AATAATTGCAATGCTCTATCCCCA 9105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751885516225
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |