Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq6726 82.4 4e-14 >seq6726 Length=48881 Score = 82.4 bits (90), Expect = 4e-14 Identities = 73/90 (81%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 28 GGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTT 87 |||||| | | ||||| || | | | | | | |||||| |||||||||||||||| ||| Sbjct 26598 GGTGCCAAACAAGTCATTATAA-ATCCTTGTCTGATCCCCAGTCGGCATAGTTTACTGTT 26540 Query 88 AAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||||||||||||||| || || Sbjct 26539 AAGACTACAACGGTATCTGATCGTTTTTGA 26510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278358983850