Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq6726 80.6 2e-13 seq6386 80.6 2e-13 >seq6726 Length=48881 Score = 80.6 bits (88), Expect = 2e-13 Identities = 56/61 (92%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| || Sbjct 27179 CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCATGC 27122 Query 124 T 124 | Sbjct 27121 T 27121 >seq6386 Length=7625 Score = 80.6 bits (88), Expect = 2e-13 Identities = 56/61 (92%), Gaps = 2/61 (3%) Strand=Plus/Plus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| || Sbjct 7559 CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCATGC 7616 Query 124 T 124 | Sbjct 7617 T 7617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300755683700