Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq6726 214 2e-53 seq13760 158 1e-36 >seq6726 Length=48881 Score = 214 bits (236), Expect = 2e-53 Identities = 162/190 (85%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||| Sbjct 26253 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 26312 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||| | ||||||||||| ||||||||||| Sbjct 26313 CATTAGCATGGAATAATAAAATAGGACGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 26371 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| || ||| ||||| | ||||| || |||| ||||||||||| Sbjct 26372 CCGTAATGATGAATAGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAATTC 26431 Query 181 TTGGATTTAT 190 ||||||| || Sbjct 26432 TTGGATTGAT 26441 >seq13760 Length=17024 Score = 158 bits (174), Expect = 1e-36 Identities = 151/191 (79%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||| |||||||||||||| ||||||| ||||||||||||| | ||| ||||| Sbjct 55 GGAACCAGGAATTTTACTTTGAAAATATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 114 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||| ||||||| |||| | |||||| || | ||||||||| | ||||||||||| Sbjct 115 AATTGGCATGGAACAATAAATTAGGACATGTGATTCTATTTTATTGGTTTCTAGGA-TTA 173 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 || | ||||| |||| || ||| ||||| | |||| | ||||||| |||| |||| Sbjct 174 CCATGATGATGAATAGGGTCAGTTGGGGGCATTTGTATAC-ATTGTCAGAGGTACAATTA 232 Query 181 TTGGATTTATT 191 ||||||| ||| Sbjct 233 TTGGATTAATT 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511922053600