Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8339 116 3e-21 >seq8339 Length=4102 Score = 116 bits (128), Expect = 3e-21 Identities = 171/236 (72%), Gaps = 7/236 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATG-TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTT 61145 |||||| |||| |||||| || || || ||||||||||| | || ||| | ||| | Sbjct 2369 ATTTGG-GCATCCTACAAACGCGCCGAGGCATCCTTCTGGACCGCCGAAGAGATTGATCT 2311 Query 61146 GTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACA---ACATTTCATTAA 61202 |||||||||||| | |||||||| || || | ||| | ||| ||||| || Sbjct 2310 CTCCAAAGACATGCACGACTGGGACAACAAATTGAACTCTGACGAGAAACACTTCATCAA 2251 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAA-TTTATTGGAAC 61261 ||| || | || ||||||||||| ||||| || |||||||| ||||| |||||| | Sbjct 2250 ACACGTCCTCGCCTTCTTTGCCGCATCGGATGGCATCGTCAACGAGAACCTTATTGAGAG 2191 Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317 ||| ||| || || |||||| | || || || |||||||| || ||||| ||| Sbjct 2190 GTTCAGCG-GCGAAGTCCAAGTGGCCGAAGCACGCTGTTTCTATGGATTCCAAATT 2136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397491855167600