Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01]
22,208 sequences; 65,184,451 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq7640 246 5e-63
seq10433 113 7e-23
>seq7640
Length=6807
Score = 246 bits (272), Expect = 5e-63
Identities = 190/222 (86%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 8 GGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTG 67
||||||||||||| ||||||| ||| |||||| ||||||||||| ||| ||||||||
Sbjct 2347 GGGCAGGGACGTAATCAACGCATGCT-GATGACATACGCTTACTAGGTATT-CCTCGTTG 2290
Query 68 AAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGA 126
|||| ||| |||||||||| |||||||||||||||| || ||||| ||||||||||
Sbjct 2289 AAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCACAAGATTACCCAAT 2230
Query 127 CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGA 186
| | || | ||||||||| ||||| || | ||||||||||||||||||||||||||
Sbjct 2229 CTTTTCAGATAAGGTGATATACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGA 2170
Query 187 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||| |||||||
Sbjct 2169 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 2128
>seq10433
Length=10157
Score = 113 bits (124), Expect = 7e-23
Identities = 84/96 (88%), Gaps = 2/96 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| ||| |||||| ||||||||||| ||| |
Sbjct 6373 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATACGCTTACTAGGTATT-C 6430
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCC 96
||||||||||| ||| |||||||||| |||||||||
Sbjct 6431 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCC 6466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751838214720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |