Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01]
22,208 sequences; 65,184,451 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq18583 197 8e-49
seq7640 82.4 4e-14
>seq18583
Length=647
Score = 197 bits (218), Expect = 8e-49
Identities = 114/117 (97%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 587 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAAATAACATCGCCC 528
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 527 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 471
>seq7640
Length=6807
Score = 82.4 bits (90), Expect = 4e-14
Identities = 73/90 (81%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 28 GGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTT 87
|||||| | | ||||| || | | | | | | |||||| |||||||||||||||| |||
Sbjct 1799 GGTGCCAAACAAGTCATTATAA-ATCCTTGTCTGATCCCCAGTCGGCATAGTTTACTGTT 1741
Query 88 AAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||| ||||||||||||||| || ||
Sbjct 1740 AAGACTACAACGGTATCTGATCGTTTTTGA 1711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278342037120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |