Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01]
22,208 sequences; 65,184,451 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq18583 470 3e-130
seq7640 248 2e-63
>seq18583
Length=647
Score = 470 bits (520), Expect = 3e-130
Identities = 294/315 (93%), Gaps = 1/315 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG- 63
||||||||||||| ||||||| ||||||| || |||||||||||||||||||| ||||
Sbjct 155 TGGTCCGGCCGGGTCTTTCCTCCTGGGGAGCCACATGCCCTTCACTGGGTGTGTTGGGGG 214
Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123
| |||||| |||||||||||||||||||||||||||||||||||| | ||| |||||||
Sbjct 215 AACCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATACA 274
Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183
|||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||
Sbjct 275 TTAGCATGGAATAATAAAATAGGACGTGTGATTCTATTTTGTTGGTTTCTAGGACCGCCG 334
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 335 TAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTG 394
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 395 GATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTG 454
Query 304 AACGAAAGTTAGGGG 318
|||||||||||||||
Sbjct 455 AACGAAAGTTAGGGG 469
>seq7640
Length=6807
Score = 248 bits (274), Expect = 2e-63
Identities = 221/280 (79%), Gaps = 20/280 (7%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| ||||||||| |||| |||||| ||||||||||||||||||||||||||
Sbjct 1450 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGATTTTTACTTTGAAAAAATTAGAGTGTT 1509
Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158
|||||||||| ||||||||||| ||||||||||| | ||||
Sbjct 1510 CAAAGCAGGCT-------------------ATGGAATAATAAAATAGGACGTGTGATTCT 1550
Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218
||||||||||||||||||| |||||||||| ||||||| ||| ||||| | ||||
Sbjct 1551 ATTTTGTTGGTTTCTAGGATTACCGTAATGATGAATAGGGTCAGTTGGGGGCATTTGTAT 1610
Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278
| |||||||||||||||||||||||||| || ||||| ||||||||||||||| |
Sbjct 1611 TACATTGTCAGAGGTGAAATTCTTGGATTGATGTAAGACAAACTACTGCGAAAGCATCTG 1670
Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||||||| |||||| |||| ||||||| |||| |||
Sbjct 1671 CCAAGGATGACTTCATTGATCA-AGAACGAAGGTTAAGGG 1709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914996752384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |