Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq18583 470 3e-130 seq7640 248 2e-63 >seq18583 Length=647 Score = 470 bits (520), Expect = 3e-130 Identities = 294/315 (93%), Gaps = 1/315 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG- 63 ||||||||||||| ||||||| ||||||| || |||||||||||||||||||| |||| Sbjct 155 TGGTCCGGCCGGGTCTTTCCTCCTGGGGAGCCACATGCCCTTCACTGGGTGTGTTGGGGG 214 Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123 | |||||| |||||||||||||||||||||||||||||||||||| | ||| ||||||| Sbjct 215 AACCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATACA 274 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183 |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| Sbjct 275 TTAGCATGGAATAATAAAATAGGACGTGTGATTCTATTTTGTTGGTTTCTAGGACCGCCG 334 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 335 TAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTG 394 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 395 GATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTG 454 Query 304 AACGAAAGTTAGGGG 318 ||||||||||||||| Sbjct 455 AACGAAAGTTAGGGG 469 >seq7640 Length=6807 Score = 248 bits (274), Expect = 2e-63 Identities = 221/280 (79%), Gaps = 20/280 (7%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| |||| |||||| |||||||||||||||||||||||||| Sbjct 1450 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGATTTTTACTTTGAAAAAATTAGAGTGTT 1509 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||||||| ||||||||||| ||||||||||| | |||| Sbjct 1510 CAAAGCAGGCT-------------------ATGGAATAATAAAATAGGACGTGTGATTCT 1550 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||||||||||||||||||| |||||||||| ||||||| ||| ||||| | |||| Sbjct 1551 ATTTTGTTGGTTTCTAGGATTACCGTAATGATGAATAGGGTCAGTTGGGGGCATTTGTAT 1610 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | |||||||||||||||||||||||||| || ||||| ||||||||||||||| | Sbjct 1611 TACATTGTCAGAGGTGAAATTCTTGGATTGATGTAAGACAAACTACTGCGAAAGCATCTG 1670 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||| |||||| |||| ||||||| |||| ||| Sbjct 1671 CCAAGGATGACTTCATTGATCA-AGAACGAAGGTTAAGGG 1709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914996752384