Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq7640 331 1e-88 >seq7640 Length=6807 Score = 331 bits (366), Expect = 1e-88 Identities = 228/258 (88%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2210 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2151 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||| || | | ||||||||||||||||| |||| Sbjct 2150 ACCTGTTATTGCCTCCAACTTCCATCAACTAAACGTTGATAGTCCCTCTAAGAAGTCAGC 2091 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| || ||| | || |||||||||||| ||||||||||||||||||||||||| Sbjct 2090 AGCCAGCCGTAGCCAGCTGGACTATTTAGCAGGAGAAGGTCTCGTTCGTTATCGGAATTA 2031 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct 2030 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAAATCAAGA 1971 Query 241 AAGAGCTATCAATCTGTC 258 || ||||||||||||||| Sbjct 1970 AAAAGCTATCAATCTGTC 1953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796628576448