Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq18583 174 2e-41 seq7640 109 7e-22 >seq18583 Length=647 Score = 174 bits (192), Expect = 2e-41 Identities = 159/194 (82%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct 326 CTAGAAACCAACAAAATAGAATCACACGTCCTATTTTATTATTCCATGCTAATGTATTCA 267 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCC-GC 124 ||| ||||||||||||||||||||||||||| |||| |||||| |||||||||| || | Sbjct 266 GGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAATCCTGGTTCCCCCAAC 207 Query 125 ACA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCG 181 ||| ||| |||| ||||| ||||| ||| |||| || | || |||| | || Sbjct 206 ACACCCAGTGAAGGGCAT-GTGGCTCCCCAGGAGGAAAGACCCGGCCGGACCAGTGCACG 148 Query 182 CCGTGAGGCGGACC 195 | |||||||||||| Sbjct 147 CGGTGAGGCGGACC 134 >seq7640 Length=6807 Score = 109 bits (120), Expect = 7e-22 Identities = 140/194 (72%), Gaps = 22/194 (11%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| ||||||||||| Sbjct 1567 CTAGAAACCAACAAAATAGAATCACACGTCCTATTTTATTATTCCAT------------- 1521 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||||||||||||||||||||||||| |||| |||||| |||||||||| | | Sbjct 1520 ------AGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAATCCTGGTTCCCTCCAA 1467 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182 || ||| | ||| |||| | ||||||||||||| | || || |||||| | | Sbjct 1466 CACCCAGTAAAGTGCATTGAAGTTCACCAAGAGGTAAGCCTCCAACAAATCAGTACACAC 1407 Query 183 CGTGAGGCGGACCA 196 | |||||||||| Sbjct 1406 CAAAAGGCGGACCA 1393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595071948672