Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01]
22,208 sequences; 65,184,451 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq18583 174 2e-41
seq7640 109 7e-22
>seq18583
Length=647
Score = 174 bits (192), Expect = 2e-41
Identities = 159/194 (82%), Gaps = 5/194 (3%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct 326 CTAGAAACCAACAAAATAGAATCACACGTCCTATTTTATTATTCCATGCTAATGTATTCA 267
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCC-GC 124
||| ||||||||||||||||||||||||||| |||| |||||| |||||||||| || |
Sbjct 266 GGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAATCCTGGTTCCCCCAAC 207
Query 125 ACA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCG 181
||| ||| |||| ||||| ||||| ||| |||| || | || |||| | ||
Sbjct 206 ACACCCAGTGAAGGGCAT-GTGGCTCCCCAGGAGGAAAGACCCGGCCGGACCAGTGCACG 148
Query 182 CCGTGAGGCGGACC 195
| ||||||||||||
Sbjct 147 CGGTGAGGCGGACC 134
>seq7640
Length=6807
Score = 109 bits (120), Expect = 7e-22
Identities = 140/194 (72%), Gaps = 22/194 (11%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct 1567 CTAGAAACCAACAAAATAGAATCACACGTCCTATTTTATTATTCCAT------------- 1521
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
||||||||||||||||||||||||| |||| |||||| |||||||||| | |
Sbjct 1520 ------AGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAATCCTGGTTCCCTCCAA 1467
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182
|| ||| | ||| |||| | ||||||||||||| | || || |||||| | |
Sbjct 1466 CACCCAGTAAAGTGCATTGAAGTTCACCAAGAGGTAAGCCTCCAACAAATCAGTACACAC 1407
Query 183 CGTGAGGCGGACCA 196
| ||||||||||
Sbjct 1406 CAAAAGGCGGACCA 1393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595071948672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |