Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq18583 264 1e-68 seq7640 158 1e-36 >seq18583 Length=647 Score = 264 bits (292), Expect = 1e-68 Identities = 174/191 (91%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||| |||||||||||||||||||||| ||||||||||||| | ||| ||||| Sbjct 213 GGAACCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 272 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||| | ||||||||||| |||||||||||||| Sbjct 273 CATTAGCATGGAATAATAAAATAGGACGTGTGATTCTATTTTGTTGGTTTCTAGGACCG- 331 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 332 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 391 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 392 TTGGATTTATT 402 >seq7640 Length=6807 Score = 158 bits (174), Expect = 1e-36 Identities = 147/190 (77%), Gaps = 20/190 (11%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 1473 GGAACCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT------------ 1520 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||||||||| ||||||||||| | ||||||||||| ||||||||||| Sbjct 1521 -------ATGGAATAATAAAATAGGACGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 1572 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| || ||| ||||| | ||||| ||||||| ||||||||||| Sbjct 1573 CCGTAATGATGAATAGGGTCAGTTGGGGGCATTTGTATTACATTGTCAGAGGTGAAATTC 1632 Query 181 TTGGATTTAT 190 ||||||| || Sbjct 1633 TTGGATTGAT 1642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511889848320