Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01]
22,208 sequences; 65,184,451 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq18583 264 1e-68
seq7640 158 1e-36
>seq18583
Length=647
Score = 264 bits (292), Expect = 1e-68
Identities = 174/191 (91%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||| |||||||||||||||||||||| ||||||||||||| | ||| |||||
Sbjct 213 GGAACCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 272
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||| | ||||||||||| ||||||||||||||
Sbjct 273 CATTAGCATGGAATAATAAAATAGGACGTGTGATTCTATTTTGTTGGTTTCTAGGACCG- 331
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 332 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 391
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 392 TTGGATTTATT 402
>seq7640
Length=6807
Score = 158 bits (174), Expect = 1e-36
Identities = 147/190 (77%), Gaps = 20/190 (11%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1473 GGAACCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT------------ 1520
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||||||||| ||||||||||| | ||||||||||| |||||||||||
Sbjct 1521 -------ATGGAATAATAAAATAGGACGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 1572
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| || ||| ||||| | ||||| ||||||| |||||||||||
Sbjct 1573 CCGTAATGATGAATAGGGTCAGTTGGGGGCATTTGTATTACATTGTCAGAGGTGAAATTC 1632
Query 181 TTGGATTTAT 190
||||||| ||
Sbjct 1633 TTGGATTGAT 1642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511889848320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |