Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008925.1_202017-03-01] 22,208 sequences; 65,184,451 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq7640 351 2e-94 seq10433 150 3e-34 >seq7640 Length=6807 Score = 351 bits (388), Expect = 2e-94 Identities = 261/304 (86%), Gaps = 1/304 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||| |||||||||||| | || ||| ||| || || | |||||||| Sbjct 2044 GAACGAGACCTTCTCCTGCTAAATAGTCCAGCTGGCTACGGCTGGCTGCTGACTTCTTAG 2103 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| | | || |||||||||| |||||||||||||||||||||||||||| Sbjct 2104 AGGGACTATCAACGTTTAGTTGATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTT 2163 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| | Sbjct 2164 AGATGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATATCACCTTATCT 2223 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | || | ||||||||||||| ||||| |||||| |||||||||||||||||||||||| Sbjct 2224 GAAAAGATTGGGTAATCTTGTGAAACTTGGTCGTGATGGGGATAGAGCATTGCAATTATT 2283 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| Sbjct 2284 GCTCTTCAACGAGGAATACCTAGTAAGCGTATGTCATCAGCATGCGTTGATTACGTCCCT 2343 Query 319 GCCC 322 |||| Sbjct 2344 GCCC 2347 >seq10433 Length=10157 Score = 150 bits (166), Expect = 3e-34 Identities = 89/93 (96%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 236 GGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCAT 295 |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 6466 GGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATACCTAGTAAGCGTATGTCAT 6407 Query 296 CAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||||||||||||||||||||||||||| Sbjct 6406 CAGCATGCGTTGATTACGTCCCTGCCCTTTGTA 6374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946989645824