Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01]
24,639 sequences; 68,656,445 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq8501 246 5e-63
seq11467 113 7e-23
>seq8501
Length=6877
Score = 246 bits (272), Expect = 5e-63
Identities = 190/222 (86%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 8 GGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTG 67
||||||||||||| ||||||| ||| |||||| ||||||||||| ||| ||||||||
Sbjct 2415 GGGCAGGGACGTAATCAACGCATGCT-GATGACATACGCTTACTAGGTATT-CCTCGTTG 2358
Query 68 AAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGA 126
|||| ||| |||||||||| |||||||||||||||| || ||||| ||||||||||
Sbjct 2357 AAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCACAAGATTACCCAAT 2298
Query 127 CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGA 186
| | || | ||||||||| ||||| || | ||||||||||||||||||||||||||
Sbjct 2297 CTTTTCAGATAAGGTGATATACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGA 2238
Query 187 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||| |||||||
Sbjct 2237 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 2196
>seq11467
Length=10148
Score = 113 bits (124), Expect = 7e-23
Identities = 84/96 (88%), Gaps = 2/96 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| ||| |||||| ||||||||||| ||| |
Sbjct 6364 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATACGCTTACTAGGTATT-C 6421
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCC 96
||||||||||| ||| |||||||||| |||||||||
Sbjct 6422 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCC 6457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751820504885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |