Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq22850 77.0 8e-12 >seq22850 Length=231 Score = 77.0 bits (84), Expect = 8e-12 Identities = 105/147 (71%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||| ||| | ||| ||||||||||||| | | |||||||| ||||||| Sbjct 230 ATCTGCACTGTCATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTTAA 171 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||| | | || Sbjct 170 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGATCCTCATA 111 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTC 161 | || | ||||| || ||||||| ||| Sbjct 110 GGTAAGACCGCCTTTAACCGGGGGTTC 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260489351488