Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq8501 331 1e-88 >seq8501 Length=6877 Score = 331 bits (366), Expect = 1e-88 Identities = 228/258 (88%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2278 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2219 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||| || | | ||||||||||||||||| |||| Sbjct 2218 ACCTGTTATTGCCTCCAACTTCCATCAACTAAACGTTGATAGTCCCTCTAAGAAGTCAGC 2159 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| || ||| | || |||||||||||| ||||||||||||||||||||||||| Sbjct 2158 AGCCAGCCGTAGCCAGCTGGACTATTTAGCAGGAGAAGGTCTCGTTCGTTATCGGAATTA 2099 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct 2098 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAAATCAAGA 2039 Query 241 AAGAGCTATCAATCTGTC 258 || ||||||||||||||| Sbjct 2038 AAAAGCTATCAATCTGTC 2021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796609811559