Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01]
24,639 sequences; 68,656,445 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq20407 273 2e-71
seq8501 158 1e-36
>seq20407
Length=645
Score = 273 bits (302), Expect = 2e-71
Identities = 176/191 (92%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||
Sbjct 211 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 270
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||
Sbjct 271 CATTAGCATGGAATAATAAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 329
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 330 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 389
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 390 TTGGATTTATT 400
>seq8501
Length=6877
Score = 158 bits (174), Expect = 1e-36
Identities = 147/190 (77%), Gaps = 20/190 (11%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1541 GGAACCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCT------------ 1588
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||||||||| ||||||||||| | ||||||||||| |||||||||||
Sbjct 1589 -------ATGGAATAATAAAATAGGACGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 1640
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| || ||| ||||| | ||||| ||||||| |||||||||||
Sbjct 1641 CCGTAATGATGAATAGGGTCAGTTGGGGGCATTTGTATTACATTGTCAGAGGTGAAATTC 1700
Query 181 TTGGATTTAT 190
||||||| ||
Sbjct 1701 TTGGATTGAT 1710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511877790560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |