Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq3068 91.5 3e-16 >seq3068 Length=10989 Score = 91.5 bits (100), Expect = 3e-16 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 173 CCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCCCAG 232 || ||||||||||| | |||||| || || || ||||| || || ||||||| | ||| Sbjct 9985 CCATCCTCGCCCCATCTGTAGGCTCGACTACGAGCATGCTCGTGCGGGAAGTGAGTCCAA 10044 Query 233 GCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGGTAG 292 || || || | ||| || || ||||| | || ||| ||||||| |||||| ||||| Sbjct 10045 GCATCACCGTTGGCACTATAATCTTCTCTAACGGTGGCCCATTGTCGTTCGGAGAGGTAA 10104 Query 293 GGGCCCCA 300 |||||||| Sbjct 10105 GGGCCCCA 10112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007751638880