Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq22850 78.8 3e-12 >seq22850 Length=231 Score = 78.8 bits (86), Expect = 3e-12 Identities = 96/131 (73%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 349 CAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTC 408 ||||||||| | ||| | |||||||||| | | |||||| ||||| |||| | | Sbjct 214 CAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTTAAATCATTCATGCAAGAC 155 Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468 | | ||| | | ||||| ||| |||||||||||||| | |||| || |||||| || Sbjct 154 CGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGATCCTCATAGGTAAGACCGCCTTTA 95 Query 469 ACTGGGGCTTC 479 || |||| ||| Sbjct 94 ACCGGGGGTTC 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701980545664