Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008935.1_202017-03-01] 24,639 sequences; 68,656,445 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq20409 284 2e-74 seq22189 122 1e-25 >seq20409 Length=535 Score = 284 bits (314), Expect = 2e-74 Identities = 233/278 (84%), Gaps = 4/278 (1%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| Sbjct 121 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 178 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 179 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTTAGAATCCATGCCA 238 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| || |||| |||| |||| ||||| |||||||||||||||||||||||| || Sbjct 239 GAACGCGGCGATTTCCTCCAGCACGTCGTACGAGGATACGAATAGGCTTCGGCCCCGGAC 298 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240 ||||||||| | ||| || || |||| || | | | | || ||||| ||| Sbjct 299 CTTAGCAGGGC-ATAACTCCTCTCTCGTAGAAGTCGGGAGAGGT-AATTGCCGGATAGCA 356 Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| || |||| ||||| ||||||||||||||||| Sbjct 357 ATTTGACAGCGCGCTGGGATGAATCCTTTGCAGACGAC 394 >seq22189 Length=255 Score = 122 bits (134), Expect = 1e-25 Identities = 102/123 (83%), Gaps = 4/123 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| |||||||| |||||| ||||| || | |||| | Sbjct 137 GTACGAGAGGAACCGTTCA-TTCG---TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 82 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| || |||||||||||||||||||||||||||| |||||||| ||| | Sbjct 81 GGCGCGAAGCTATCACGTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 22 Query 121 GAA 123 ||| Sbjct 21 GAA 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819004464896