Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01] 20,258 sequences; 69,592,563 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq16572 491 8e-137 seq6851 250 5e-64 >seq16572 Length=643 Score = 491 bits (544), Expect = 8e-137 Identities = 298/314 (95%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| || |||| |||||||||| |||| ||||| Sbjct 153 TGGTCCGGCTGGACCTTTCCTTCTGGGGAACCTCATGGCCTTCACTGGCTGTGG-GGGGA 211 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 212 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 271 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 272 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 331 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 332 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 391 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 392 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGGGA 451 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 452 ACGAAAGTTAGGGG 465 >seq6851 Length=6801 Score = 250 bits (276), Expect = 5e-64 Identities = 221/280 (79%), Gaps = 21/280 (8%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| |||| |||||| |||||||||||||||||||||||||| Sbjct 1448 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGATTTTTACTTTGAAAAAATTAGAGTGTT 1507 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||||||| ||||||||||| ||||||||||| | |||| Sbjct 1508 CAAAGCAGGC--------------------ATGGAATAATAAAATAGGACGTGTGATTCT 1547 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||||||||||||||||||| |||||||||| ||||||| ||| ||||| | |||| Sbjct 1548 ATTTTGTTGGTTTCTAGGATTACCGTAATGATGAATAGGGTCAGTTGGGGGCATTTGTAT 1607 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | |||||||||||||||||||||||||| || ||||| ||||||||||||||| | Sbjct 1608 TACATTGTCAGAGGTGAAATTCTTGGATTGATGTAAGACAAACTACTGCGAAAGCATCTG 1667 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||| |||||| |||| ||||||| |||| ||| Sbjct 1668 CCAAGGATGACTTCATTGATCA-AGAACGAAGGTTAAGGG 1706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915014598784