Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01]
20,258 sequences; 69,592,563 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq18166 113 1e-22
seq18629 93.3 1e-16
seq19203 86.0 2e-14
>seq18166
Length=970
Score = 113 bits (124), Expect = 1e-22
Identities = 145/198 (73%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354
|||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| |
Sbjct 559 GGGGACTAAGACAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATGC 618
Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413
| | |||||| | |||||| | || || ||| |||| |||||| | | | | | ||
Sbjct 619 CTAAACAAAGAGATGCGAAAATGTGAATTCTAGCTAATCTCATAAAATAGGATATAAATT 678
Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470
||||||||||||| || ||||||||||||| | ||| ||||||||||| |||
Sbjct 679 TTAAGGATTGTAGTCTGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATC 738
Query 471 AGCATGCTACGGTGAATA 488
|||||| ||||||||||
Sbjct 739 AGCATGTCACGGTGAATA 756
>seq18629
Length=555
Score = 93.3 bits (102), Expect = 1e-16
Identities = 132/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || | || | ||||||| | |||||| ||| | |||||| |
Sbjct 140 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATGTTTGTACAAAAG 199
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| |||||| | || | ||| |||||| ||| | | | | | | |||||||||||
Sbjct 200 GATGCGAAAGTGTGAACTTTAGCTAATCCCCAAAATTGGATATAATAT-GGATTGTAGTC 258
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT-GCTACGGTG 484
|| |||||||||| ||||| ||||| ||||||||||| |||| ||| | ||||||
Sbjct 259 TGTAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCATCGTCACGGTG 318
Query 485 AAT 487
|||
Sbjct 319 AAT 321
>seq19203
Length=661
Score = 86.0 bits (94), Expect = 2e-14
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| ||| ||| | ||||| | | |||||| ||| | |||||||
Sbjct 97 CAAGTCATCATGGCCCAAATGGTGTGGGCGATAGACGTGCCACATATTCCTATACAAAAT 156
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| |||| | |||| | ||| |||| ||||||| | | |||||||||||
Sbjct 157 GATGCGATAATGCGAATTTGAGCTAATCTAATAAAGTAGGATATAACAAGGATTGTAGTC 216
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| |||||||||||||||| ||||| ||||||||||| || || | | ||||||
Sbjct 217 TGAAACTCGACTATATGAATAAGGAATTACTAGTAATCGTGAATAAGAACGTCACGGTGG 276
Query 486 AT 487
||
Sbjct 277 AT 278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503695319680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |