Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01]
20,258 sequences; 69,592,563 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq6851 331 1e-88
>seq6851
Length=6801
Score = 331 bits (366), Expect = 1e-88
Identities = 228/258 (88%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2207 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2148
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||| ||||||||| || | | ||||||||||||||||| ||||
Sbjct 2147 ACCTGTTATTGCCTCCAACTTCCATCAACTAAACGTTGATAGTCCCTCTAAGAAGTCAGC 2088
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
||| || ||| | || |||||||||||| |||||||||||||||||||||||||
Sbjct 2087 AGCCAGCCGTAGCCAGCTGGACTATTTAGCAGGAGAAGGTCTCGTTCGTTATCGGAATTA 2028
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct 2027 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAAATCAAGA 1968
Query 241 AAGAGCTATCAATCTGTC 258
|| |||||||||||||||
Sbjct 1967 AAAAGCTATCAATCTGTC 1950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796643628498
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |