Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01] 20,258 sequences; 69,592,563 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq16572 178 2e-42 seq6851 105 8e-21 >seq16572 Length=643 Score = 178 bits (196), Expect = 2e-42 Identities = 157/192 (82%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 322 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 263 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| |||| ||||||||||||||||| || || Sbjct 262 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCC-CA 204 Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGGTAGGG-CTGGGTAATGCAGTACTCGCC 183 || ||| ||||||| || || ||| ||| | || | | |||||||||| Sbjct 203 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCAGCCGGACCAGTACTCGCG 144 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 143 GTGAGGCGGACC 132 >seq6851 Length=6801 Score = 105 bits (116), Expect = 8e-21 Identities = 139/194 (72%), Gaps = 23/194 (12%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct 1564 CTAGAAACCAACAAAATAGAATCACACGTCCTATTTTATTATTCCATGC----------- 1516 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 |||||||||||||||||||||| |||| |||||| |||||||||| | | Sbjct 1515 ---------CTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAATCCTGGTTCCCTCCAA 1465 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182 || ||| | ||| |||| | ||||||||||||| | || || |||||| | | Sbjct 1464 CACCCAGTAAAGTGCATTGAAGTTCACCAAGAGGTAAGCCTCCAACAAATCAGTACACAC 1405 Query 183 CGTGAGGCGGACCA 196 | |||||||||| Sbjct 1404 CAAAAGGCGGACCA 1391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595083192372