Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01]
20,258 sequences; 69,592,563 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq16572 178 2e-42
seq6851 105 8e-21
>seq16572
Length=643
Score = 178 bits (196), Expect = 2e-42
Identities = 157/192 (82%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 322 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 263
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| |||| ||||||||||||||||| || ||
Sbjct 262 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCC-CA 204
Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGGTAGGG-CTGGGTAATGCAGTACTCGCC 183
|| ||| ||||||| || || ||| ||| | || | | ||||||||||
Sbjct 203 CAGCCAGTGAAGGCCATGAGGTTCCCCAGAAGGAAAGGTCCAGCCGGACCAGTACTCGCG 144
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 143 GTGAGGCGGACC 132
>seq6851
Length=6801
Score = 105 bits (116), Expect = 8e-21
Identities = 139/194 (72%), Gaps = 23/194 (12%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||| |||||||||||||
Sbjct 1564 CTAGAAACCAACAAAATAGAATCACACGTCCTATTTTATTATTCCATGC----------- 1516
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|||||||||||||||||||||| |||| |||||| |||||||||| | |
Sbjct 1515 ---------CTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAATCCTGGTTCCCTCCAA 1465
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182
|| ||| | ||| |||| | ||||||||||||| | || || |||||| | |
Sbjct 1464 CACCCAGTAAAGTGCATTGAAGTTCACCAAGAGGTAAGCCTCCAACAAATCAGTACACAC 1405
Query 183 CGTGAGGCGGACCA 196
| ||||||||||
Sbjct 1404 CAAAAGGCGGACCA 1391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595083192372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |