Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01]
20,258 sequences; 69,592,563 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq16572 297 2e-78
seq6851 159 4e-37
>seq16572
Length=643
Score = 297 bits (328), Expect = 2e-78
Identities = 181/191 (95%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 209 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 268
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 269 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 327
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 328 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 387
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 388 TTGGATTTATT 398
>seq6851
Length=6801
Score = 159 bits (176), Expect = 4e-37
Identities = 147/190 (77%), Gaps = 21/190 (11%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1471 GGAACCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC------------- 1517
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||||||||| ||||||||||| | ||||||||||| |||||||||||
Sbjct 1518 -------ATGGAATAATAAAATAGGACGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 1569
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| || ||| ||||| | ||||| ||||||| |||||||||||
Sbjct 1570 CCGTAATGATGAATAGGGTCAGTTGGGGGCATTTGTATTACATTGTCAGAGGTGAAATTC 1629
Query 181 TTGGATTTAT 190
||||||| ||
Sbjct 1630 TTGGATTGAT 1639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511899520320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |