Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01] 20,258 sequences; 69,592,563 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq2449 91.5 3e-16 >seq2449 Length=15865 Score = 91.5 bits (100), Expect = 3e-16 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 173 CCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCCCAG 232 || ||||||||||| | |||||| || || || ||||| || || ||||||| | ||| Sbjct 9996 CCATCCTCGCCCCATCTGTAGGCTCGACTACGAGCATGCTCGTGCGGGAAGTGAGTCCAA 10055 Query 233 GCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGGTAG 292 || || || | ||| || || ||||| | || ||| ||||||| |||||| ||||| Sbjct 10056 GCATCACCGTTGGCACTATAATCTTCTCTAACGGTGGCCCATTGTCGTTCGGAGAGGTAA 10115 Query 293 GGGCCCCA 300 |||||||| Sbjct 10116 GGGCCCCA 10123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007795799360