Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20striiformis_20[genbank_20GCA_5F002008965.1_202017-03-01]
20,258 sequences; 69,592,563 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq6851 351 2e-94
seq9308 150 3e-34
>seq6851
Length=6801
Score = 351 bits (388), Expect = 2e-94
Identities = 261/304 (86%), Gaps = 1/304 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||| |||||||||||| | || ||| ||| || || | ||||||||
Sbjct 2041 GAACGAGACCTTCTCCTGCTAAATAGTCCAGCTGGCTACGGCTGGCTGCTGACTTCTTAG 2100
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||| | | || |||||||||| ||||||||||||||||||||||||||||
Sbjct 2101 AGGGACTATCAACGTTTAGTTGATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTT 2160
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct 2161 AGATGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATATCACCTTATCT 2220
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| || | ||||||||||||| ||||| |||||| ||||||||||||||||||||||||
Sbjct 2221 GAAAAGATTGGGTAATCTTGTGAAACTTGGTCGTGATGGGGATAGAGCATTGCAATTATT 2280
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct 2281 GCTCTTCAACGAGGAATACCTAGTAAGCGTATGTCATCAGCATGCGTTGATTACGTCCCT 2340
Query 319 GCCC 322
||||
Sbjct 2341 GCCC 2344
>seq9308
Length=10155
Score = 150 bits (166), Expect = 3e-34
Identities = 89/93 (96%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 236 GGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCAT 295
|||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 6464 GGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATACCTAGTAAGCGTATGTCAT 6405
Query 296 CAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| |||||||||||||||||||||||||||
Sbjct 6404 CAGCATGCGTTGATTACGTCCCTGCCCTTTGTA 6372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947008116224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |