Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1345 304 2e-80 >seq1345 Length=198670 Score = 304 bits (336), Expect = 2e-80 Identities = 200/220 (91%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct 132527 CAAAGCAGGCCTATGCCCGAATACATTAGCATGGAATAATAAAATAGGACGTGCGGTTCT 132468 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||||||||||||||||| ||||||||||||||||||||||||| ||||| | ||||| Sbjct 132467 ATTTTGTTGGTTTCTAGAGTCGCCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTAT 132408 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 132407 TCAGTTGCTAGAGGTGAAATTCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTG 132348 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||||||| ||||||| |||||||| Sbjct 132347 CCAAGGATGTTTTCATTAATCA-AGAACGAAGGTTAGGGG 132309 Score = 96.9 bits (106), Expect = 6e-18 Identities = 71/80 (89%), Gaps = 2/80 (3%) Strand=Plus/Minus Query 21 TTCCTTCTGGG-GATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTAC 78 || ||||| || || ||| |||||||||||||||||||| |||||| ||||||||||||| Sbjct 132724 TTACTTCTTGGTGAGCCGGCATGCCCTTCACTGGGTGTGTCGGGGAACCAGGACTTTTAC 132665 Query 79 TTTGAAAAAATTAGAGTGTT 98 |||| |||||||||||||| Sbjct 132664 CTTGAGAAAATTAGAGTGTT 132645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915181101120