Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1345 536 5e-150 seq375 219 2e-54 >seq1345 Length=198670 Score = 536 bits (594), Expect = 5e-150 Identities = 524/665 (79%), Gaps = 25/665 (4%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || ||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| Sbjct 130582 TCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGC 130523 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 130522 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTT 130463 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||| ||||||||||| || ||||||||||||||||| |||| |||||| | ||| | Sbjct 130462 TGGAGAGAGAGTTAAACAGTACGTGAAATTGTTGAAATGGAAACGCTTGAAGTCAGTCGC 130403 Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCA---GGCCAGC 271 | | | | ||| || | | | | |||||| | || ||||| ||||||| Sbjct 130402 GTTCTCTGGGATTCAGCCTGGCTTTTGCTTGGTGCATT--TCC-CGGTCTACGGGCCAGC 130346 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATA 331 || | | | | ||| |||||| ||||||||||| || |||||| | ||||||| Sbjct 130345 ATGAATTTTGACCAATGGAAAAAGGCTTGGGGAATGTGGCACC-TTCGGGTG-TGTTATA 130288 Query 332 GCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTC------CGCGCTCCGG-----CTA 380 |||| || || || | ||| ||||||| | |||| ||| || Sbjct 130287 GCCCCTTGTCACATACGTTG-GTTGGGATTGAGGTCTTAGTGCACGCTTCGGTTGTGCTT 130229 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||||||||| | ||| || ||||||||| ||||||||||||||||||||||| Sbjct 130228 TGATGCTGGCGTAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAACA 130169 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500 | | |||||||||||||||| ||||||| ||||| ||||||||||| || |||||| Sbjct 130168 TGTCTGCGAGTGTTTGGGTGCAAAACCCGAGCGCGAAATGAAAGTGAT---AGTTGGGAA 130112 Query 501 CC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 || | | || || ||||| || ||| || || | | || |||| ||| ||||| Sbjct 130111 CCTCTTTAGAGGGGCACCGACGCCCGGACCAGACCTTCTGTGACGGATCCGAGGTAGAGC 130052 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 130051 ATATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGCATAGGGTGAAGCCAGAGGAAA 129992 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||||||| |||| ||||| ||||||||||||||||||||| |||||||||| Sbjct 129991 CTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATGTGGGTATAGG 129932 Query 679 GGCGA 683 ||||| Sbjct 129931 GGCGA 129927 >seq375 Length=3361 Score = 219 bits (242), Expect = 2e-54 Identities = 142/156 (91%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || ||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| Sbjct 156 TCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGC 97 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 96 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTT 37 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAA 190 |||| ||||||||||| || |||||||||||||||| Sbjct 36 TGGAGAGAGAGTTAAACAGTACGTGAAATTGTTGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079955705750