Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1828 80.6 5e-13 >seq1828 Length=11562 Score = 80.6 bits (88), Expect = 5e-13 Identities = 158/232 (68%), Gaps = 19/232 (8%) Strand=Plus/Minus Query 127 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCA-AAGATACC-C 184 ||||||||| ||||||||| || || | |||||| | ||| | ||| ||| || | Sbjct 2209 GGCAGTTTGTCTGGGGCGGACGTCTTTAATAGAGTATCAGAGACATCCACAAGGTATGTC 2150 Query 185 TCAGCTTGGATGGAAACCATGC-------GCACAGTGCAA--AGGCAAAAGGG------- 228 | | ||||||||| |||| || | || || || ||| | || | Sbjct 2149 TTAAATTGGATGGAGACCAAGCAAGCCATGAACGGTATAATAAGGTATAATGACTTAAGC 2090 Query 229 -TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGC 287 || || |||| || ||| ||||| | ||| ||| |||| |||| |||||||||||| Sbjct 2089 ATGCTTAACTGAGAGACCTATAAGTCAAACAGATACGTAAGTAGGGCATAATGATCCGGC 2030 Query 288 GGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| ||||||| |||||||| | | |||||||| ||| || |||||| Sbjct 2029 GGTATATAATGGAATAGCCGTCGCACAATAGATAAAAGTTACGCTAGGGATA 1978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982379713440