Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1828 93.3 1e-16 >seq1828 Length=11562 Score = 93.3 bits (102), Expect = 1e-16 Identities = 164/234 (70%), Gaps = 14/234 (6%) Strand=Plus/Plus Query 179 TTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC 238 |||| | | || ||| | | ||| ||||||||||||| |||||||||||| |||| | Sbjct 10870 TTAAACCTCGCTACTCATATTAACATGCTGACCCATTATGCAAAAGGTACGCCGTCATTC 10929 Query 239 AA-------CAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCAC 291 || ||| | ||| ||||||| || ||| |||||||||| |||||| Sbjct 10930 AATCTAATTTAAATTAAATTCCGACTGCTTATAGAGCTACTAATTCAGGATCT-TTTCAC 10988 Query 292 T-CCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGT 350 | | ||| | |||||||| |||||| | || ||| | ||||||||||| | | | Sbjct 10989 TAGTCATCTAC---TTTCTTTTCAACTTTCCTTTACAGTAAT-GTTCACTATCGCTAAAT 11044 Query 351 CAGTAGTATTTAG-CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTC 403 || || |||| |||| ||||||||| |||| ||||| ||||| | |||| Sbjct 11045 TTATAATACTTAGCCCTTAGAGGATGGTTCCCCTTTATTCCGACAAGTTATCTC 11098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241574360960