Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1345 116 4e-24 >seq1345 Length=198670 Score = 116 bits (128), Expect = 4e-24 Identities = 75/82 (91%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 132446 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 132505 Query 61 ATTCGGGCGTAAGCCTGCTTTG 82 |||||||| || |||||||||| Sbjct 132506 ATTCGGGCATAGGCCTGCTTTG 132527 Score = 102 bits (112), Expect = 1e-19 Identities = 93/115 (81%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 83 AACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAA-GGCAT 140 ||||||||||||||||||||||||||||||||||||| | |||| ||| |||| ||||| Sbjct 132645 AACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCCCGACACACCCAGTGAAGGGCAT 132704 Query 141 ACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGCGGACC 195 | |||||||||||| ||| | | | | |||||| ||||||||| |||| Sbjct 132705 GCCGGCTCACCAAGAAGTAAGACCCAGGCAGACAGTACATACCGTGAGGCAGACC 132759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595188093210